Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F002234955.1_202017-07-28] 883 sequences; 29,478,624 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq35 141 2e-28 seq611 131 3e-25 >seq35 Length=214891 Score = 141 bits (156), Expect = 2e-28 Identities = 325/479 (68%), Gaps = 18/479 (4%) Strand=Plus/Minus Query 244970 GGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATC 245029 ||||| | ||| |||| || ||| | || || | || |||||| || || ||| || Sbjct 142913 GGGCAGAACAGAGTCCAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTC 142854 Query 245030 CAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGC--TCGTCCGAGCCAGTGTTCTTCCTCA 245087 || ||||| | ||| || || | || ||||| || ||| || |||||| | | Sbjct 142853 CACAGGGCGTAGAACAGATCACGGG--CTCTGACTTCCTCCTTACCGTGGTTCTTGCGAA 142796 Query 245088 GCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGG 245147 | |||| || || |||| ||| | ||||| ||||| | ||| | ||| | ||||| | Sbjct 142795 GATCCAGGAACTCGAAGATATCGGCATGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAG 142736 Query 245148 GCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTA 245206 | |||||||| ||||||||||| || ||| | || | |||||| | ||| || | Sbjct 142735 GGCGCTTGTTACCTCCCTGGTCGACATACCTAGC-AGTGTTGTTGAACACGCGAAGCATG 142677 Query 245207 GGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGG 245266 || || || ||||||||| || || ||||| ||||||| ||| || | | || Sbjct 142676 GGAACAATACCGTTAGAGGACCCATTAGTGCCACCAATGTAGGAGCCTGTGGCAC---GG 142620 Query 245267 TTGCTGATGGAC----ATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTT 245322 ||| | || || | ||| | ||||| || ||| ||||| | ||| || |||| Sbjct 142619 ATGC-GGTGAACGTTAAGGCCGATACCGCCAGCTGTCTTCGAGATCATGGCACAAGTCTT 142561 Query 245323 GATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGA 245382 | |||||| || ||||| ||||| ||| |||||| | || || ||||| || | Sbjct 142560 AAGGGTGTCGTAGATACCCTCAATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGC 142501 Query 245383 CAGCTGGGGCTTGGGGCTGCACGAG--TTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 |||||||| |||||| | || || ||||||||||| || || || || ||||| Sbjct 142500 AAGCTGGGG-TTGGGG-AGTACCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTA 142444 >seq611 Length=111286 Score = 131 bits (144), Expect = 3e-25 Identities = 296/442 (67%), Gaps = 5/442 (1%) Strand=Plus/Minus Query 42705 CTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTC 42764 || || ||||| |||| || ||||| ||||| ||||| || | || || ||||||||| Sbjct 14894 CTTGTGGCCTTCGCCGCTGTGGAGGGAATCTTTTTCTCTGGATCTTTTGCTTCCATCTTC 14835 Query 42765 TGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824 ||||| ||| || | | |||||| || ||||| ||||| ||||| |||||| | Sbjct 14834 TGGCTGAAGAAGCGTGGCTTGATGCCTGGTCTCACTTTCTCCAACGAGCTCATCTCTCGT 14775 Query 42825 GACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAG 42884 |||||||| ||||| | |||||||| ||||| || || || ||| | | || Sbjct 14774 GACGAGGGACTGCACACAGACTTTGCTTGCCTTCTCTTTTC---TCACTTGAACCATCGC 14718 Query 42885 CCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTC 42944 ||| ||| || | || || ||| ||||| |||| || || |||||||| Sbjct 14717 CCCGACAAGAAGGTTATTGAGGATATTATCGTTGAGGCTGTGGCCATTGAACAGGAGTTC 14658 Query 42945 CTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTAC 43004 | || | | || || || | || | ||||||||| | || |||||| |||| Sbjct 14657 TTGACAGACGCTCTTCCTGTTGCTCTCCTGGGCATGAACTCTAAGCTAATGTGCCAGTAT 14598 Query 43005 ATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACAC 43063 || ||| ||| || || | || | || | ||| || | || |||| | Sbjct 14597 ATTGAGTTCGTTGCTGATCGGCTGTTGGTTGCTCTTGGAAACAAGAAG-TACTTCAACTC 14539 Query 43064 GCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGA 43123 || |||||||||||| ||||| | |||||| | | || ||||| ||||| || || Sbjct 14538 TCCCAACCCCTTCGACTTCATGGAAAGTATCTCGCTTGCAGGAAAGACGAACTTCTTTGA 14479 Query 43124 GAAGCGCGTCGCCGACTACCAG 43145 |||||| || | ||||||||| Sbjct 14478 GAAGCGTGTTGGTGACTACCAG 14457 Score = 113 bits (124), Expect = 9e-20 Identities = 202/289 (70%), Gaps = 7/289 (2%) Strand=Plus/Minus Query 42309 ATGTACAAGAAGGC-GCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGA 42367 ||||||||||| || | || | ||| ||||||||||||||||||||| || |||| || Sbjct 15345 ATGTACAAGAAAGCCGAAGCT-TCCTTCTGGACCGCCGAGGAGATTGATCTCTCCAAAGA 15287 Query 42368 CACGGCCGGCTGGGAGTCACTGTCTGAGA-ACGAAAAG---TTTTTCCTCAAAAACATAC 42423 | || |||| | || |||||| |||| || | |||| || | | | Sbjct 15286 TCTGCACGACTGGAACA-ACCGTCTGAATGACGATGAGCGTTATTTCATCTCTCATGTCC 15228 Query 42424 TGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGA 42483 | ||||||||||| ||||||||||| || || ||||||||| || | |||| | Sbjct 15227 TTGCCTTCTTCGCTGCCTCTGACGGAATCGTTAATGAGAACTTGTTGGAGCGCTTCAGCA 15168 Query 42484 AAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACG 42543 | ||||||||| |||||| || |||||||||||||||||||| || |||||| Sbjct 15167 ATGAGGTGCAGGTGCCTGAGGCTCGATGCTTCTACGGCTTCCAGATCATGATTGAGAACA 15108 Query 42544 TGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCC 42592 | || || ||| ||| || ||| | | || |||||| ||| || Sbjct 15107 TTCATTCGGAGACATACTCCCTGCTGATTGATACATACATCAAGGAGCC 15059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944328776856080