Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F002234955.1_202017-07-28] 883 sequences; 29,478,624 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq379 105 6e-18 seq135 104 2e-17 >seq379 Length=11336 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | |||| ||||| || | ||| ||| |||||||||||||||||| Sbjct 2845 TCCACCACGCAGACGCAGCACCAGGTGGAGCGTGCTCTCCTTTTGAATATTGTAATCGGA 2786 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || | ||| || | ||| || |||||| |||| | |||||||| || ||||| Sbjct 2785 GAGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGG 2726 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064 |||||||||||||| ||| || ||| | |||| || | ||||| | ||| | Sbjct 2725 GATGCCCTCCTTGTCTTGGATCTTGCTCTTCACGTTG-TCAATCGTGTCGGAGGACTCCA 2667 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 | || | ||| | || || ||||| ||||| || || || ||||||||| Sbjct 2666 CCTCCAGGGTAATGGTCTTTCCGGTGAGAGTCTTGACGAAGATCTGCATG 2617 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 ||||| || || || || || |||||| | ||||| ||| || ||||| || ||| Sbjct 2050 GTAGATTCCTTCTGGATGTTATAATCGGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCA 1991 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| | ||||| |||||||| || ||||| || |||||||| ||| || ||| |||| Sbjct 1990 GCGAAAATCAAGCGCTGCTGGTCAGGAGGGATACCCTCCTTATCCTGAATCTTCGACTTG 1931 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | ||||| | |||||| || | ||| | || ||||| || ||||| Sbjct 1930 ACATTGTCAATAGTGTCGCTGGACTCGACCTCCAAGGTGATGGTCTTGCCCGTGAGAGTC 1871 Query 127097 TTTACAAAAATCTGCAT 127113 || || ||||||||||| Sbjct 1870 TTGACGAAAATCTGCAT 1854 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||| ||| | || || || ||||| ||||||||||| | Sbjct 2616 CCACCACGCAGACGGAGGACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAATCAGAC 2557 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || || || |||||||| |||| | ||||| ||||| ||||| Sbjct 2556 AAGGTACGGCCATCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCAGGAGGG 2497 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||| ||| ||| || ||||| | |||| |||||| | | ||| ||| Sbjct 2496 ATACCCTCCTTATCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCTACT 2437 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || || || ||||| || || || || ||||| Sbjct 2436 TCTAATGTGATAGTCTTTCCCGTGAGAGTCTTAACGAAGATTTGCAT 2390 >seq135 Length=180033 Score = 104 bits (114), Expect = 2e-17 Identities = 133/181 (73%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || ||||| ||||| |||| || ||||| ||| || ||||| || |||||| ||||| Sbjct 120695 TTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 120636 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044 | |||||||| || || || || |||||||||||| ||| || ||||| |||| || Sbjct 120635 AGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG-TC 120577 Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 || |||||| | ||| || |||| ||| | || || || ||||| || || || || Sbjct 120576 GATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 120517 Query 127105 A 127105 | Sbjct 120516 A 120516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475495551659920