Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F002234955.1_202017-07-28] 883 sequences; 29,478,624 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq35 116 5e-20 >seq35 Length=214891 Score = 116 bits (128), Expect = 5e-20 Identities = 208/301 (69%), Gaps = 2/301 (1%) Strand=Plus/Plus Query 259883 ACCTACGAGGCCATGTCGCAGCAGTTGTTCACCTCA-GCGACGCCCACGCTCTTTAATGC 259941 |||||| | |||||| ||| | | ||||| ||| || | || || || || ||||| Sbjct 142420 ACCTACCACCTCATGTCTCAGAAATACTTCAC-TCATGCTTCTCCTACTCTGTTCAATGC 142478 Query 259942 CGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGAT 260001 || || || | || ||| | |||| ||||| || | || ||||||| ||| || Sbjct 142479 TGGTACTCCCCAACCCCAGCTTGCGTCTTGCTTCCTCGTCGATATGAAGGAGGATAGCAT 142538 Query 260002 CGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCAT 260061 ||||| ||||| ||||| || ||| || || | ||||| ||| | || ||||| || Sbjct 142539 TGAGGGTATCTACGACACCCTTAAGACTTGTGCCATGATCTCGAAGACAGCTGGCGGTAT 142598 Query 260062 CGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCA 260121 ||| || || ||| | || ||| | ||| ||||| | | ||||| || || Sbjct 142599 CGGCCTTAACGTTCACCGCATCCGTGCCACAGGCTCCTACATTGGTGGCACTAATGGGTC 142658 Query 260122 GTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCA 260181 || ||||| |||| |||||||||||||| || ||| |||| || | || |||||||| Sbjct 142659 CTCTAACGGTATTGTTCCCATGCTTCGCGTGTTCAACAACACTGCTAGGTATGTCGACCA 142718 Query 260182 G 260182 | Sbjct 142719 G 142719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177726033027046