Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F002234955.1_202017-07-28] 883 sequences; 29,478,624 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq611 141 1e-28 seq35 91.5 2e-13 >seq611 Length=111286 Score = 141 bits (156), Expect = 1e-28 Identities = 347/516 (67%), Gaps = 14/516 (3%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCT-GATATTCTCCAT 129786 ||||| ||||| |||||||| |||||||| ||||| || | ||||| |||| | ||||| Sbjct 14461 TAGTCACCAACACGCTTCTCAAAGAAGTTCGTCTTTCC-TGCAAGCGAGATACTTTCCAT 14519 Query 129787 AAAATCAAATGGGTTCTTTGAGTTCCAA-ATTGCTGGCACTCCAATCTGTTTGAGGAGAC 129845 || || || ||||| ||||| | | | || | ||||| | || | Sbjct 14520 GAAGTCGAAGGGGTTGGGAGAGTTGAAGTACTTCTTGTT-TCCAAGAGCAACCAACAGCC 14578 Query 129846 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAG-GTTA 129904 |||| | ||| ||||||| |||| |||| || |||||||| || | ||| | | Sbjct 14579 GATCAGCAACGAACTCAATATACTGGCACATTAGCTTAGAGTTCATGCCCAGGAGAGCAA 14638 Query 129905 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCG 129964 || || || ||||| | |||| ||| |||||| ||||||| || | || | Sbjct 14639 CA-GGAAGAGCGTCTGTCAAGAACTCCTGTTCAATGGCCACAGCCTCAACGATAATATCC 14697 Query 129965 TGAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCC 130024 | ||| || | || | || | || | ||| ||||| ||||| || Sbjct 14698 TCAATAACCTTCTTGTCGGGGCGATGGTTCAAGTGAGAAAAGAGAAGGCAAGCAAAGTCT 14757 Query 130025 TGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGA 130084 ||| || ||||||||||| |||||||| || || ||||| ||||| ||||| | Sbjct 14758 GTGTGCAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCAGGCATCAAG 14817 Query 130085 CCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACA 130144 || |||||||||| |||||| || | | ||| || |||||||| ||||| ||||||||| Sbjct 14818 CCACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCAGAGAAAAAGATTCCCTCCACA 14877 Query 130145 CACGCGAACGCAAAGAGACGCTCAGC-AAAGGAGCGGGACTTTGTATC---AAACCACTT 130200 ||||| || | || |||| ||| |||| | || | |||| || ||| | Sbjct 14878 GCGGCGAAGGCCACAAGGCGCTGAGCGAAAGTA----GATTCCTTATCAGAAATCCATCT 14933 Query 130201 CATCGCCCACTGCGCCTTTTTCTCGATACACGGGAC 130236 ||| |||||||| ||||| ||| |||||| || || Sbjct 14934 CATGGCCCACTGGGCCTTCTTCCTGATACAAGGAAC 14969 >seq35 Length=214891 Score = 91.5 bits (100), Expect = 2e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 118694 GACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGT 118753 |||| | ||||||| |||| || ||||| || || |||| || || | || | Sbjct 143274 GACAAAAGTAGGAAGCGCGAGAGAAGCCAGGTTGCAGACAGCAACTTCGTCAGGAGCACT 143215 Query 118754 GTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 118813 |||||| || || |||||||| | || || || ||| || |||| |||||| || || Sbjct 143214 GTACTCAATGATCTCCGTGCAAAGATTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTT 143155 Query 118814 TGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGA 118873 ||| |||| || ||||||||||||||||| | || | || ||||| || || | Sbjct 143154 GCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATAAAGGGGTTGCCAGTCTCGGTCTGAGC 143095 Query 118874 CTTGAGAATAGCCTTCCA 118891 || |||||||| | ||| Sbjct 143094 CTCAAGAATAGCATACCA 143077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618428374021480