Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F002234955.1_202017-07-28]
883 sequences; 29,478,624 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq35 145 8e-30
>seq35
Length=214891
Score = 145 bits (160), Expect = 8e-30
Identities = 312/460 (68%), Gaps = 6/460 (1%)
Strand=Plus/Plus
Query 53242 TGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAA 53301
|||||| ||| || | ||| || || ||||| || || || | || || ||||||||
Sbjct 142416 TGAGACCTACCACCTCATGTCTCAGAAATACTTCACTCATGCTTCTCCTACTCTGTTCAA 142475
Query 53302 CGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTC 53361
|||||||| || || ||| | || |||||||| || | |||||||| ||
Sbjct 142476 TGCTGGTACTCCCCAACCCCAGCTTGCGTCTTGCTTCCTCGTCGATATGAAGGAGGATAG 142535
Query 53362 GATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGG 53421
|| || || |||||||| || || ||| |||||| ||||| ||| | || ||
Sbjct 142536 CATTGAGGGTATCTACGACACCCTTAAGACTTGTGCCATGATCTCGAAGACAGCTGGCGG 142595
Query 53422 TATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAAC 53479
|||||| | || | || | || ||||||| | ||| | || || || ||
Sbjct 142596 TATCGGCCTTAAC-GTTC-ACCGCATCCGTGCCACAGGCTCCTACATTGGTGGCACTAAT 142653
Query 53480 GGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTC 53539
|| | | | || || || || ||||| ||||| ||||||||||| || |||| |||
Sbjct 142654 GGGTCCTCTAACGGTATTGTTCCCATGCTTCGCGTGTTCAACAACACTGCTAGGTATGTC 142713
Query 53540 AACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCC 53599
||||||| ||| |||||| || | || || || ||||||||||| ||||| |||
Sbjct 142714 GACCAGGGAGGTAACAAGCGCCCTGGCGCTTTTGCTATTTACCTCGAGCCTTGGCATGCC 142773
Query 53600 GACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGT 53659
|| || | ||||| || || || || ||| || ||| | || || | | ||||
Sbjct 142774 GATATCTTCGAGTTCCTGGATCTTCGCAAGAACCACGGTAAGGAGGAAGTCAGAGCCCGT 142833
Query 53660 GACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATG 53698
|| ||||| ||| || ||||||| || || || ||||||
Sbjct 142834 GATCTGTTCTAC-GCCCTGTGGACCCCTGATCTGTTCATG 142872
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547209960103400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |