Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F002234955.1_202017-07-28]
883 sequences; 29,478,624 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq379 102 6e-17
>seq379
Length=11336
Score = 102 bits (112), Expect = 6e-17
Identities = 147/205 (72%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || |||||||| || ||||||||||| || ||||| | ||||| || || |
Sbjct 2390 ATGCAAATCTTCGTTAAGACTCTCACGGGAAAGACTATCACATTAGAAGTAGAGTCTTCA 2449
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | || | | || || || ||| | || || |||||
Sbjct 2450 GACACCATCGACAATGTCAAGAGCAAGA-TCCAGGATAAGGAGGGTATCCCTCCTGATCA 2508
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||||| | || ||||| || || ||||| ||||| | || || || ||||||||
Sbjct 2509 ACAGCGTCTCATCTTTGCTGGAAAGCAACTTGAAGATGGCCGTACCTTGTCTGATTACAA 2568
Query 23790 CATACAAAAAGAGTCCACATTACAT 23814
|| ||||| || |||||| | |||
Sbjct 2569 TATCCAAAAGGAATCCACACTGCAT 2593
Score = 93.3 bits (102), Expect = 3e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || || |||||||| || || ||||| | || || || ||||
Sbjct 1854 ATGCAGATTTTCGTCAAGACTCTCACGGGCAAGACCATCACCTTGGAGGTCGAGTCCAGC 1913
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||| |||| ||| | || | || ||| || || || ||| | || || || ||
Sbjct 1914 GACACTATTGACAATGTCAAGTC-GAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCA 1972
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| || || || || ||||| || || || || | |||||| | |||||| ||
Sbjct 1973 GCAGCGCTTGATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTTTCCGATTATAA 2032
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || || || ||
Sbjct 2033 CATCCAGAAGGAATCTAC 2050
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338005962488564
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |