Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F002234955.1_202017-07-28]
883 sequences; 29,478,624 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq35 233 3e-56
seq611 111 2e-19
>seq35
Length=214891
Score = 233 bits (258), Expect = 3e-56
Identities = 597/901 (66%), Gaps = 16/901 (2%)
Strand=Plus/Minus
Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579
||||| ||||| || ||||||| |||||||||| |||||| || || | || | |
Sbjct 142958 TCAAACTCATCACCATAAACATCTGCCAAACCAGGGGCTTCATTGGGGCAGAACAGAGTC 142899
Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639
|| ||||| | || ||| || ||||| || |||||||| |||| || || ||
Sbjct 142898 CAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGGGCGTAGAAC 142839
Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699
||||| |||| ||| ||| || || || ||||| |||||| |||||||| |
Sbjct 142838 AGATCACGGGCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAGGAACTCGAAG 142779
Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759
||||| | |||||| || || || || || || | | | || || || || |||||||||
Sbjct 142778 ATATCGGCATGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAGGGCGCTTGTTACCTCCC 142719
Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819
|| || | ||| || |||||||| || | || | | ||| |||| ||| ||||||||
Sbjct 142718 TGGTCGACATACCTAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAG 142659
Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879
| ||||| || ||| ||| || || ||||| || || |||||
Sbjct 142658 GACCCATTAGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGGCCG 142599
Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939
|| || || || | || ||||| | ||||| || | ||||| ||||| |||||
Sbjct 142598 ATACCGCCAGCTGTCTTCGAGATCATGGCACAAGTCTTAAGGGTGTCGTAGATACCCTCA 142539
Query 76940 ATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGAC---ATTTGATGATGAACAGTT 76996
|| ||||| ||| |||| | | || | ||| |||| | || | || |||
Sbjct 142538 ATGCTATCCTCCTTCATATCGACGAGGA---AGCAAGACGCAAGCTGGGGTTGGGGAGTA 142482
Query 76997 CCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTAT 77056
|| ||||| |||| |||||||| ||||||||||| |||| | ||| | || | |||
Sbjct 142481 CCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGAGACATGAGGTGGTAG 142422
Query 77057 GTTTCAATAACTGCTTCTATATCCCATTG--ATGAATTCCTACAGCGACACGCATCAACA 77114
|| ||||| | ||| |||| ||| |||||| || || || |||||||||||||
Sbjct 142421 GTCTCAATGGCCTTTTCAATAT--TGTTGCCATGAATGCCAACCGCAACACGCATCAACA 142364
Query 77115 TATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAG 77174
||||| || || || || ||| ||| ||| || || ||| || || | |
Sbjct 142363 AGTGCTGCGGACGCTCAGCAACCTTGCCATTGATTCGCAGCAGGTAGGACCGCTCGAGTG 142304
Query 77175 TTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTT 77234
| || ||||| ||| ||||||| ||||| | || || | |||| | || || || |
Sbjct 142303 TCTTGAAACCGAAAAAGTTGTAGTTGAAGTCACGATCATATACAATAGCAGAGTTGAGCT 142244
Query 77235 TGTCCTTATATTTGGTAACAATATC-CATGACAGTGGTAGAAATAATTGGAGATCGTATT 77293
|| || ||| | ||||| || | | | | | ||||| ||||| | || ||
Sbjct 142243 CATCAGCATGTTTCATGACAATTTCATACGTCTCT-TTCGAAATCATTGGCG--CGGGTT 142187
Query 77294 CC--ATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGttttt 77351
| ||||| || |||||||||| | | ||| || || || | || |
Sbjct 142186 GCTTGTTTTTGGGGTTAACATAGTGGTACAGGTCCGAGATGACCAGAGAGAACTGCTTCT 142127
Query 77352 ttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGAT 77411
| |||| |||||| || || || |||||||| | ||||||| || ||||| || || |
Sbjct 142126 TGGTTTGCTTGTGGAGGTTGGACACGGCTATACGGGCAGCTAAGATGGCATAATCGGGGT 142067
Query 77412 G 77412
|
Sbjct 142066 G 142066
>seq611
Length=111286
Score = 111 bits (122), Expect = 2e-19
Identities = 179/257 (70%), Gaps = 3/257 (1%)
Strand=Plus/Plus
Query 46927 TCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATC 46986
|| ||||||||||| ||||| ||||| || ||||| || |||| || |||| | |
Sbjct 15098 TCCGAATGAATGTTCTCAATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCAGGCACC 15157
Query 46987 TGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCA 47046
|| ||||| | | || || || |||| |||||||| || ||||| ||| |||||
Sbjct 15158 TGCACCTCATTGCTGAAGCGCTCCAACAAGTTCTCATTAACGATTCCGTCAGAGGCAGCG 15217
Query 47047 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCA---GTTTATTCCAG 47103
|| || || | ||||| || ||||| |||||| | ||| | || ||||||
Sbjct 15218 AAGAAGGCAAGGACATGAGAGATGAAATAACGCTCATCGTCATTCAGACGGTTGTTCCAG 15277
Query 47104 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTT 47163
|| | | |||||| || | ||| | || || || |||||||| || || || |||||
Sbjct 15278 TCGTGCAGATCTTTGGAGAGATCAATCTCCTCGGCGGTCCAGAAGGAAGCTTCGGCTTTC 15337
Query 47164 TTATACATATTCCATAT 47180
|| ||||| | ||| ||
Sbjct 15338 TTGTACATTTGCCAAAT 15354
Score = 109 bits (120), Expect = 8e-19
Identities = 334/514 (65%), Gaps = 7/514 (1%)
Strand=Plus/Plus
Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398
|| ||||| ||||| ||||| ||||| || || || || || ||| | | || ||| ||
Sbjct 14455 TTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTCGTCTTTCCTGCAAGCGAGATACTT 14514
Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458
||||| || || || || || | | || | || || ||| | | | |
Sbjct 14515 TCCATGAAGTCGAAGGGGTTGGGAGAGTTGAAGTACTTCTTGTTTCCAAGAGCAACCAAC 14574
Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518
|| | ||| |||||||| || |||||| ||| | | | | ||||| || | |||
Sbjct 14575 AGCCGATCAGCAACGAACTCAATATACTGGCACATTAGCTTAGAGTTCATGCCCAGGAGA 14634
Query 46519 TTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATC--CGATATTA 46576
|| || ||||| || || | ||||| |||||||| | ||||| || ||||| ||
Sbjct 14635 GCAACAGGAAGAGCGTCTGTCAAGAACTCCTGTTCAATGGCCACAGCCTCAACGATAATA 14694
Query 46577 TCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAA 46636
|| || || || || |||| |||| || ||| | | || ||||
Sbjct 14695 TCCTCAATAACCTT--CTTGTCGGGGCGATGGTTCAAGTGAGAAAAGAGAAGGCAAGCAA 14752
Query 46637 AATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCA 46696
| || || || || || || | | || | ||||| || || ||||| |||||||
Sbjct 14753 AGTCTGTGTGCAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCAGGCA 14812
Query 46697 TTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTT 46756
| | |||||||| || ||||| || || | || ||||||||||| || || || || |
Sbjct 14813 TCAAGCCACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCAGAGAAAAAGATTCCCT 14872
Query 46757 CTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---GAATCCACC 46813
| ||||| ||||| || ||||| | || || || | | || |||| |||||| |
Sbjct 14873 CCACAGCGGCGAAGGCCACAAGGCGCTGAGCGAAAGTAGATTCCTTATCAGAAATCCATC 14932
Query 46814 TTTGAGCCCAATCAGCCTTTTTCTTTACACAAGG 46847
| ||||| | ||||| ||| | | ||||||
Sbjct 14933 TCATGGCCCACTGGGCCTTCTTCCTGATACAAGG 14966
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712926530986560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |