Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F002234985.1_202017-07-28]
889 sequences; 28,231,324 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq887 111 1e-19
>seq887
Length=81893
Score = 111 bits (122), Expect = 1e-19
Identities = 381/580 (66%), Gaps = 37/580 (6%)
Strand=Plus/Minus
Query 20946 TAAACGTGGGCGTCACCCAAGGTGTGCA-CAAAGTCTCCCGGGGTCAGGCCCGTGACGTG 21004
|| || || || ||||||| ||| || | || ||| || ||| |||| |||| | ||
Sbjct 13811 TACACATGCGCATCACCCATGGTATGAATCAGAGTG-CCGGGGTTCAGATCCGTCGCATG 13753
Query 21005 AGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCAT 21064
|| | | || |||||| || || || || ||||| || || || || || |||||
Sbjct 13752 GGCCAGTATATGCGTCAGCAGCGCATACGACGCAATGTTGAATGGCACACCAAGCCCCAT 13693
Query 21065 GTCGGCGGACCTCTGGTACAGCTGGCAGGACAG-CTCCCCCCG------AGCC------- 21110
||| || | || |||||| | || || || |||||| | ||||
Sbjct 13692 ATCGCACGAACGTTGATACAGCAGACACGATAGGCTCCCCTTGTTGTCCAGCCCATTCGG 13633
Query 21111 -------ACGTAAAACTGACACAAA-ACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGT 21162
|| || ||||| | |||| | ||||| || ||||| |||||| | || |
Sbjct 13632 ATATGAGACATAGAACTG-CGCAAACATATGACAGGGCGGGAGCGCCATCTTCTTCAGAT 13574
Query 21163 CCGCGGGGTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAGAT 21222
|||| ||||||||||| | ||| | |||||| || || |||| | | || | || |
Sbjct 13573 CCGCCGGGTTCCACGCACTCATGATGATGCGGCGGTCAAAGGGC-GTTTCTT--TCAGCT 13517
Query 21223 C---CACCACGTAACGC-AGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCC 21278
||| || | ||| |||||||| || ||||| || ||| | | | ||| |
Sbjct 13516 TGCGCACAACCTC-CGCGAGCTGGTCGACGCCCTGGCCTGTGTAATCCGTCTTGGCGTCG 13458
Query 21279 CTGTACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCG 21338
||||||| ||||| ||||| | |||||||||||| ||||| || || |||||||| |
Sbjct 13457 ATGTACTCGGCCCCGAAATGCCGCCACTGGAACCCATACACAGGGCCTAGATCGCCGACC 13398
Query 21339 CGGCGGTCCCCGAAGCCCTGCGCCG-CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAAT 21397
||||| |||| ||||| | | ||| || ||||| |||| ||||||| ||
Sbjct 13397 TCGCGGTGCCCG-AGCCCAACTTTGTCCAGGAACTCGCGGCTGCCGTTACCGTCCCAGAT 13339
Query 21398 TTTTACGCC-GCGGCGCGACAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCA 21456
||| | ||| || | ||| || | ||||| |||| | || ||| ||||| || |
Sbjct 13338 TTTGATGCCTGCTTC-CGAGAGGGGGATGGAGGAGGTGCATCCGGAGATGAACCAGAGGA 13280
Query 21457 ACTCCTCCACGACGCCCCTCCAAAACACCCTTTTGGTGGT 21496
||| | | |||| | | | || || | |||||||||
Sbjct 13279 GCTCGGCGATGACGGCACGCAGGAAAACGCGTTTGGTGGT 13240
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427771365180720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |