Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F002234985.1_202017-07-28]
889 sequences; 28,231,324 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq31 100 3e-16
>seq31
Length=69716
Score = 100 bits (110), Expect = 3e-16
Identities = 199/289 (69%), Gaps = 7/289 (2%)
Strand=Plus/Minus
Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421
||||||||||| || | ||| || || | || ||||| | ||||| || || |||
Sbjct 35264 ATGTATGTATCAATCAGCAGGGAGTATGTCTCCGAATGAATGTTCTCAATCATGATCTGG 35205
Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTC-TTG-AGAAAATCTCTCTACGA 93479
|| |||||||| |||| ||| || | | |||||| || ||| ||| ||| | || |
Sbjct 35204 AAGCCGTAGAAGCATCGAGCCTCAGGCACCTGCACCTCATTGCTGAAGCGCTC-CAACAA 35146
Query 93480 GATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAAT 93539
| || ||||| || || || || || || || || || || | | ||| || ||||
Sbjct 35145 G-TTCTCATTAACGATTCCGTCAGAGGCAGCGAAGAAGGCAAGGACATGAGAGATGAAAT 35087
Query 93540 GTTTCTCATCATCTTT---AAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTT 93596
|||||| || || | | || | ||| ||| |||||||| || ||||| | |
Sbjct 35086 AACGCTCATCGTCATTCAGACGGTTGTTCCAGTCGTGCAGATCTTTGGAGAGATCAATCT 35027
Query 93597 CTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATAT 93645
| ||| | ||||| || || ||||| ||||| |||||||| | ||| ||
Sbjct 35026 CCTCGGCGGTCCAGAAGGAAGCTTCGGCTTTCTTGTACATTTGCCAAAT 34978
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556854611884360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |