Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F002234985.1_202017-07-28]
889 sequences; 28,231,324 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq201 113 4e-20
>seq201
Length=150170
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || ||||| ||| | || || || || |||| | ||||| || | |
Sbjct 24394 ATGCAAATCTTCGTTAAGACTCTCACGGGAAAGACTATCACATTAGAAGTAGAGTCTTCA 24453
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || |||| || || || || ||||||||||| || || ||||||
Sbjct 24454 GACACCATCGACAATGTCAAGAGCAAGATCCAGGATAAGGAGGGTATCCCTCCTGATCAA 24513
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || ||||| || || || | || ||| ||| ||| | || ||||||||
Sbjct 24514 CAGCGTCTCATCTTTGCTGGAAAGCAACTTGAAGATGGCCGTACCTTGTCTGATTACAAT 24573
Query 22399 ATTCAAAAAGAATCCAC 22415
|| ||||| ||||||||
Sbjct 24574 ATCCAAAAGGAATCCAC 24590
Score = 109 bits (120), Expect = 5e-19
Identities = 119/158 (75%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 22258 ACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAG 22317
||||| || |||||| ||| ||||||| | || | | || || || || ||||||
Sbjct 24205 ACTCTCGAGGTGGAATCCAGCGATACCATTGATAACGTTAAGTCGAAGATCCAGGACAAG 24264
Query 22318 GAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCAC 22377
|||||||| || || || || || ||||| || || || ||||| ||||| |||||| |
Sbjct 24265 GAGGGTATCCCTCCTGACCAGCAGCGTCTGATTTTCGCTGGCAAGCAGTTGGAGGATGGC 24324
Query 22378 CGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
|||||| | ||||| || |||||||| || ||||| ||
Sbjct 24325 CGCACCTTGTCCGACTATAACATTCAGAAGGAATCGAC 24362
Score = 98.7 bits (108), Expect = 8e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || ||| | || || || || |||| | || || || ||| |
Sbjct 23858 ATGCAGATTTTCGTCAAGACTCTCACGGGCAAGACCATCACCTTGGAGGTCGAGTCCAGC 23917
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || |||| || ||||| || ||||||||||| || || || ||
Sbjct 23918 GACACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCAG 23977
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || | || || || ||||| ||| | |||||| |||||| | |||||||| |||
Sbjct 23978 CAGCGCTTGATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTTTCCGATTATAAC 24037
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || || ||||| ||
Sbjct 24038 ATCCAGAAGGAATCTAC 24054
Score = 96.9 bits (106), Expect = 3e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || ||| | ||||| || || | || || || ||||| || ||
Sbjct 24622 ATGCAGATCTTCGTCAAGACTCTCACCGGAAAGACCATTACCCTGGAGGTGGAGTCCTCC 24681
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | | || || || |||||||||||||| || || || || ||
Sbjct 24682 GACACGATTGACAACGTGAAGAGCAAGATCCAAGACAAGGAGGGCATCCCTCCTGACCAG 24741
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || || || || || ||||| || ||| | ||| |||||||||||||
Sbjct 24742 CAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGGAGGACCCTCTCCGATTACAAT 24801
Query 22399 ATTCAAAAAGA 22409
|||||||| ||
Sbjct 24802 ATTCAAAAGGA 24812
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419723452378285
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |