Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F002234985.1_202017-07-28]
889 sequences; 28,231,324 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq578 107 2e-17
>seq578
Length=103365
Score = 107 bits (118), Expect = 2e-17
Identities = 354/547 (65%), Gaps = 4/547 (1%)
Strand=Plus/Minus
Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051
||| | ||||| || || || ||||| || ||||| ||||| | | |||
Sbjct 47275 GCTGTCGGTATTGACTTGGGTACCACCTACTCCTGTGTGGGTGTCTTCAGAGATGACCGC 47216
Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111
||||||| |||||||| || || |||||| | |||||||| || | || |||||||
Sbjct 47215 ATTGAAATCATTGCCAACGACCAGGGTAACCGTACTACTCCCTCGTTCGTGGCTTTCACC 47156
Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171
|| || || | | | | |||||||| || || |||| | | | || ||| |||
Sbjct 47155 GACACCGAGCGTCTCATCGGTGATGCCGCCAAGAATCAGGTCGCCATGAACCCTCACAAC 47096
Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231
|| |||| |||||||| ||| | || || | | || | ||| | |||||| |
Sbjct 47095 ACCGTTTTCGATGCTAAGCGTCTGATCGGTCGTCGGTTCCAAGATGCTGAGGTTCAGTCT 47036
Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291
||||||||||| ||||||||| | |||| | || || || ||||| | |
Sbjct 47035 GATATGAAGCACTGGCCTTTCAAGGTTGTCGAGAAGGGCGGCAAGCCCATCATTGAGGTT 46976
Query 550292 -ACTCATGAAGGATCTG-TTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAA 550349
| | | |||| | || || || | || ||| | || || || ||||| | |
Sbjct 46975 GAGT--TCAAGGGCGAGACCAAGCAGTTCACCCCTGAAGAGATCTCCTCCATGGTCCTGA 46918
Query 550350 TGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAA 550409
|| ||| | || || || | | ||| || | | || || || |
Sbjct 46917 CCAAGATGCGTGAGACCGCTGAAGCCTACCTCGGTGGCACTGTCAACAACGCTGTCATCA 46858
Query 550410 CTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTG 550469
| || || || || || || ||||| || ||||| || ||||| |||||||| | || |
Sbjct 46857 CCGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCCACTAAGGATGCTGGTCTCATCG 46798
Query 550470 CTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGAC 550529
| || || || || || ||||| ||||| || |||||||| ||||| |||| || || |
Sbjct 46797 CCGGCCTGAACGTCCTCCGTATCATCAACGAGCCTACTGCCGCTGCCATTGCCTACGGTC 46738
Query 550530 TTGATAA 550536
|||| ||
Sbjct 46737 TTGACAA 46731
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029248985670610
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |