Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F002234985.1_202017-07-28]
889 sequences; 28,231,324 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq201 104 2e-17
>seq201
Length=150170
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 101279 TCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAAT 101338
|| ||||| ||||||||||||| || || || |||| ||||| |||||||| || ||
Sbjct 24812 TCCTTTTGAATATTGTAATCGGAGAGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAAG 24753
Query 101339 ATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATT 101398
|| | |||||| || || || || ||||| || || ||||| || || || || |
Sbjct 24752 ATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCTTGGATCTTGCTCTTCACGTTG 24693
Query 101399 TCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACA 101458
|| | ||||| || | ||||| || || || | || || ||||| | ||| || ||
Sbjct 24692 TCAATCGTGTCGGAGGACTCCACCTCCAGGGTAATGGTCTTTCCGGTGAGAGTCTTGACG 24633
Query 101459 AATATCTGCATG 101470
|| |||||||||
Sbjct 24632 AAGATCTGCATG 24621
Score = 98.7 bits (108), Expect = 8e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
||| || || ||||| ||||| ||||||||||| | | || | | |||| || | |||
Sbjct 24597 ATGCAGTGTGGATTCCTTTTGGATATTGTAATCAGACAAGGTACGGCCATCTTCAAGTTG 24538
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
||| || ||||| || | |||||||||||| || || || || || ||||| || || ||
Sbjct 24537 CTTTCCAGCAAAGATGAGACGCTGTTGATCAGGAGGGATACCCTCCTTATCCTGGATCTT 24478
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
|| ||| | || | ||||| || | || ||||| | |||| || || || ||
Sbjct 24477 GCTCTTGACATTGTCGATGGTGTCTGAAGACTCTACTTCTAATGTGATAGTCTTTCCCGT 24418
Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469
| ||| || || || || |||||
Sbjct 24417 GAGAGTCTTAACGAAGATTTGCAT 24394
Score = 93.3 bits (102), Expect = 3e-14
Identities = 152/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| | ||| | || || |||||||| || || || || ||||||| | ||| | | |
Sbjct 24073 ACGGAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAATCGGAAAGAGTGCGGCC 24014
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
||| || | ||||| || || || ||||| ||||| || || || || || || || ||
Sbjct 24013 ATCCTCGAGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAGGAGGGATACCCTCCTT 23954
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
||| ||||| || || ||| | || | |||||| | || || || | ||||
Sbjct 23953 ATCCTGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGACCTCCAAGGTGAT 23894
Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGT 101472
|| ||||| || | ||| || || || |||||||||||
Sbjct 23893 GGTCTTGCCCGTGAGAGTCTTGACGAAAATCTGCATGGT 23855
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396274106447373
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |