Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F002234985.1_202017-07-28] 889 sequences; 28,231,324 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq296 127 2e-23 seq168 113 6e-19 seq777 104 3e-16 seq31 86.0 8e-11 >seq296 Length=22920 Score = 127 bits (140), Expect = 2e-23 Identities = 111/138 (80%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 || |||||||||||||| || || |||||| |||||||| || | ||||| |||||| Sbjct 6244 GATAGCATCGGCGGCACCGTCACCTGCGTGATCCGCAACGTCCCCGTCGGCCTGGGCGAG 6303 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| |||||||| ||| || ||||||||||| ||||| |||||| Sbjct 6304 CCTTGCTTCGACAAGCTCGAGGCCAAGCTGGCGCACGCCATGCTCAGCATCCCCGCCACC 6363 Query 19167 AAGGGATTCGAGATTGGC 19184 ||||| || ||||| ||| Sbjct 6364 AAGGGCTTTGAGATCGGC 6381 >seq168 Length=163562 Score = 113 bits (124), Expect = 6e-19 Identities = 94/115 (82%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || |||||||| ||||| ||||| |||| | ||| | || |||||| |||| || ||| Sbjct 132827 GCTGCCAACTATCTCGATATCAAAGCTCTCTTGGATGTCGGCTGCAAGACTGTTGCGAAC 132768 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||||||| ||||| ||||| ||||||||||| ||||| || ||| Sbjct 132767 ATGATCAAGGGCAAGTCCCCCGAAGAGATTCGCAAGACCTTCAACATTCAGAACG 132713 >seq777 Length=229146 Score = 104 bits (114), Expect = 3e-16 Identities = 203/300 (68%), Gaps = 0/300 (0%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||||||||| || | || |||| ||| || ||||| |||||||| || | ||||| || Sbjct 86452 CTGGTCGACATACCTAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGA 86511 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 || || ||||| | | ||||| ||| | ||| || | ||| || || ||| Sbjct 86512 GGACCCATTAGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGGCC 86571 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||| ||||| || | ||| ||||| | || || || || ||||||||||| ||||| Sbjct 86572 GATACCGCCAGCTGTCTTCGAGATCATGGCACAAGTCTTAAGGGTGTCGTAGATACCCTC 86631 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || || ||||||| || ||||| ||||| |||| || || || | || || Sbjct 86632 AATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGCAAGCTGGGGTTGGGGAGTACC 86691 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 || ||||| || || || | || ||||| | | | | |||||| || |||||| Sbjct 86692 AGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGAGACATGAGGTGGTAGGT 86751 >seq31 Length=69716 Score = 86.0 bits (94), Expect = 8e-11 Identities = 164/242 (68%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| ||| || ||||| ||||| || | |||||||| Sbjct 35880 GCCTTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTCGTCTTTCCTGCAAGCGAGATA 35821 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||| | ||| |||||||| | ||| ||| ||| | | ||| || | | Sbjct 35820 CTTTCCATGAAGTCGAAGGGGTTGGGAGAGTTGAAGTACTTCTTGTTTCCAAGAGCAACC 35761 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 | ||| || || || || ||||| || ||||||||||| || | ||||||||| | | Sbjct 35760 AACAGCCGATCAGCAACGAACTCAATATACTGGCACATTAGCTTAGAGTTCATGCCCAGG 35701 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || || || || | || ||| ||||| | || || | || ||||| ||||| Sbjct 35700 AGAGCAACAGGAAGAGCGTCTGTCAAGAACTCCTGTTCAATGGCCACAGCCTCAACGATA 35641 Query 868931 AT 868932 || Sbjct 35640 AT 35639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107066244496813