Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F002234985.1_202017-07-28]
889 sequences; 28,231,324 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq296 127 2e-23
seq168 113 6e-19
seq777 104 3e-16
seq31 86.0 8e-11
>seq296
Length=22920
Score = 127 bits (140), Expect = 2e-23
Identities = 111/138 (80%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106
|| |||||||||||||| || || |||||| |||||||| || | ||||| ||||||
Sbjct 6244 GATAGCATCGGCGGCACCGTCACCTGCGTGATCCGCAACGTCCCCGTCGGCCTGGGCGAG 6303
Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166
|| ||||| |||||| |||||||| ||| || ||||||||||| ||||| ||||||
Sbjct 6304 CCTTGCTTCGACAAGCTCGAGGCCAAGCTGGCGCACGCCATGCTCAGCATCCCCGCCACC 6363
Query 19167 AAGGGATTCGAGATTGGC 19184
||||| || ||||| |||
Sbjct 6364 AAGGGCTTTGAGATCGGC 6381
>seq168
Length=163562
Score = 113 bits (124), Expect = 6e-19
Identities = 94/115 (82%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|| |||||||| ||||| ||||| |||| | ||| | || |||||| |||| || |||
Sbjct 132827 GCTGCCAACTATCTCGATATCAAAGCTCTCTTGGATGTCGGCTGCAAGACTGTTGCGAAC 132768
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300
||||||||||||||||| ||||| ||||| ||||||||||| ||||| || |||
Sbjct 132767 ATGATCAAGGGCAAGTCCCCCGAAGAGATTCGCAAGACCTTCAACATTCAGAACG 132713
>seq777
Length=229146
Score = 104 bits (114), Expect = 3e-16
Identities = 203/300 (68%), Gaps = 0/300 (0%)
Strand=Plus/Plus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
||||||||| || | || |||| ||| || ||||| |||||||| || | ||||| ||
Sbjct 86452 CTGGTCGACATACCTAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGA 86511
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184
|| || ||||| | | ||||| ||| | ||| || | ||| || || |||
Sbjct 86512 GGACCCATTAGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGGCC 86571
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
||| ||||| || | ||| ||||| | || || || || ||||||||||| |||||
Sbjct 86572 GATACCGCCAGCTGTCTTCGAGATCATGGCACAAGTCTTAAGGGTGTCGTAGATACCCTC 86631
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
|| || ||||||| || ||||| ||||| |||| || || || | || ||
Sbjct 86632 AATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGCAAGCTGGGGTTGGGGAGTACC 86691
Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364
|| ||||| || || || | || ||||| | | | | |||||| || ||||||
Sbjct 86692 AGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGAGACATGAGGTGGTAGGT 86751
>seq31
Length=69716
Score = 86.0 bits (94), Expect = 8e-11
Identities = 164/242 (68%), Gaps = 0/242 (0%)
Strand=Plus/Minus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || || || ||| ||| || ||||| ||||| || | ||||||||
Sbjct 35880 GCCTTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTCGTCTTTCCTGCAAGCGAGATA 35821
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
||||| | ||| |||||||| | ||| ||| ||| | | ||| || | |
Sbjct 35820 CTTTCCATGAAGTCGAAGGGGTTGGGAGAGTTGAAGTACTTCTTGTTTCCAAGAGCAACC 35761
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
| ||| || || || || ||||| || ||||||||||| || | ||||||||| | |
Sbjct 35760 AACAGCCGATCAGCAACGAACTCAATATACTGGCACATTAGCTTAGAGTTCATGCCCAGG 35701
Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930
|| || || || || | || ||| ||||| | || || | || ||||| |||||
Sbjct 35700 AGAGCAACAGGAAGAGCGTCTGTCAAGAACTCCTGTTCAATGGCCACAGCCTCAACGATA 35641
Query 868931 AT 868932
||
Sbjct 35640 AT 35639
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107066244496813
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |