Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F002234985.1_202017-07-28] 889 sequences; 28,231,324 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq578 86.0 5e-11 >seq578 Length=103365 Score = 86.0 bits (94), Expect = 5e-11 Identities = 211/320 (66%), Gaps = 0/320 (0%) Strand=Plus/Plus Query 282152 TTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCC 282211 ||||||||||| || | |||| | | |||||||| || || || || ||||| ||| Sbjct 46548 TTTCTCTTGAATTCATTAACAAAGTGGTTAACAAGACGGTTGTCGAAGTCCTCACCACCC 46607 Query 282212 AATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGA 282271 | | ||| | || | ||||| | || | ||| | || || |||| | || || Sbjct 46608 AGGTGAGTGTCACCAGCGGTAGCCTTGACCTCGAAGATACCCTCCTCAATGGTCAGGAGG 46667 Query 282272 GTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG 282331 | |||||| || |||||||| | ||| || || || || || || || Sbjct 46668 GAAACATCGAAAGTACCACCACCAAGATCGAAGATCAGGACGTTACGCTCGCCCTCGGCC 46727 Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 || || |||||||| || |||| ||||| ||||| || || || || || | | || Sbjct 46728 TTCTTGTCAAGACCGTAGGCAATGGCAGCGGCAGTAGGCTCGTTGATGATACGGAGGACG 46787 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || || || || || || ||||| |||||||| || | || || ||||| || || Sbjct 46788 TTCAGGCCGGCGATGAGACCAGCATCCTTAGTGGCCTGACGCTGAGAGTCGTTGAAGTAG 46847 Query 282452 GCAGGAACAGTAATAACGGC 282471 || || || || || || || Sbjct 46848 GCGGGGACGGTGATGACAGC 46867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740586753856914