Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F002234985.1_202017-07-28] 889 sequences; 28,231,324 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq201 167 6e-36 seq222 100 7e-16 >seq201 Length=150170 Score = 167 bits (184), Expect = 6e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| || || || |||||||| ||||||| ||||||||| | ||| || | |||||| Sbjct 24605 AGGACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAATCAGACAAGGTACGGCCATCT 24546 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| ||||| ||||| || || ||||| || || || ||||| ||||| || Sbjct 24545 TCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCAGGAGGGATACCCTCCTTATCC 24486 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| |||||||||||||| | || || ||||| ||||| ||| Sbjct 24485 TGGATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCTACTTCTAATGTGATAGTC 24426 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||| | ||| || | ||| | |||||| Sbjct 24425 TTTCCCGTGAGAGTCTTAACGAAGATTTGCAT 24394 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || |||||||| ||| || ||||| | ||||||||||| | || Sbjct 24843 ACGCAGACGCAGCACCAGGTGGAGCGTGCTCTCCTTTTGAATATTGTAATCGGAGAGGGT 24784 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 ||||||||||| | |||||| ||||||||||| || || || ||||| || || || || Sbjct 24783 CCTCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGGATGCC 24724 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||||||||| |||||| || || ||||| |||| ||||| || | Sbjct 24723 CTCCTTGTCTTGGATCTTGCTCTTCACGTTGTCAATCGTGTCGGAGGACTCCACCTCCAG 24664 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| || || | ||| || | ||| | ||||| Sbjct 24663 GGTAATGGTCTTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 24622 Score = 125 bits (138), Expect = 2e-23 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || ||||| ||||| ||||| || |||| || ||||||| | ||| Sbjct 24079 ACGAAGACGGAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAATCGGAAAGAGT 24020 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| |||||||| || | || || ||||| || || ||||| Sbjct 24019 GCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAGGAGGGATACC 23960 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| || || ||||| ||| ||| || || ||||| || || || || || Sbjct 23959 CTCCTTATCCTGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGACCTCCAA 23900 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||||||||| | ||| || | ||| | ||||| Sbjct 23899 GGTGATGGTCTTGCCCGTGAGAGTCTTGACGAAAATCTGCAT 23858 Score = 123 bits (136), Expect = 6e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||| ||||||||||| ||||| || || | || || |||| ||| || Sbjct 24387 ACGAAGACGAAGGACGAGGTGGAGAGTCGATTCCTTCTGAATGTTATAGTCGGACAAGGT 24328 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || | |||||| |||||||| || || || || ||||| || || ||||| Sbjct 24327 GCGGCCATCCTCCAACTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCAGGAGGGATACC 24268 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| || || ||||| || || |||||| || | Sbjct 24267 CTCCTTGTCCTGGATCTTCGACTTAACGTTATCAATGGTATCGCTGGATTCCACCTCGAG 24208 Query 225672 CGTGATCGTCTTGCCCGT 225689 || || |||||||| || Sbjct 24207 AGTAATGGTCTTGCCAGT 24190 >seq222 Length=253618 Score = 100 bits (110), Expect = 7e-16 Identities = 124/170 (73%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 225535 TTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGT 225594 ||||| ||| || || | ||||| || |||||||| ||||||||||| || || || Sbjct 18662 TTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATCAGGCGCTGC 18603 Query 225595 TGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCT 225654 ||||| || || ||||| |||||||| |||||||| ||| || ||||||||||| Sbjct 18602 TGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCG 18543 Query 225655 GAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 | || ||||| | || || ||||| ||||||| || || | ||| Sbjct 18542 CTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 18493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192517616696966