Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F002234985.1_202017-07-28]
889 sequences; 28,231,324 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq201 152 1e-31
seq222 105 2e-17
>seq201
Length=150170
Score = 152 bits (168), Expect = 1e-31
Identities = 158/207 (76%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || |||||||| || || || |||||| | ||||| || | |||
Sbjct 23861 CAGATTTTCGTCAAGACTCTCACGGGCAAGACCATCACCTTGGAGGTCGAGTCCAGCGAC 23920
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| ||||||||||| || || || |||||||| ||||||||
Sbjct 23921 ACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCAGCAG 23980
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || ||||| || || |||||||| ||||| | |||||| ||||||||||| ||
Sbjct 23981 CGCTTGATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTTTCCGATTATAACATC 24040
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| || ||||| || ||||| || |||
Sbjct 24041 CAGAAGGAATCTACTCTGCACCTGGTT 24067
Score = 145 bits (160), Expect = 2e-29
Identities = 158/207 (76%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || |||||||| ||||| || ||||| | || || || ||||||
Sbjct 24397 CAAATCTTCGTTAAGACTCTCACGGGAAAGACTATCACATTAGAAGTAGAGTCTTCAGAC 24456
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| ||||| || || || |||||||| || || ||
Sbjct 24457 ACCATCGACAATGTCAAGAGCAAGATCCAGGATAAGGAGGGTATCCCTCCTGATCAACAG 24516
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| || ||||| || ||||| || || |||||||| | || |||| | ||||| || |
Sbjct 24517 CGTCTCATCTTTGCTGGAAAGCAACTTGAAGATGGCCGTAC-CTTGTCTGATTACAATAT 24575
Query 178103 CCAAAAAGAATCAACACTGCATCTTGT 178129
|||||| ||||| ||||||||||| ||
Sbjct 24576 CCAAAAGGAATCCACACTGCATCTGGT 24602
Score = 120 bits (132), Expect = 7e-22
Identities = 148/200 (74%), Gaps = 2/200 (1%)
Strand=Plus/Plus
Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990
|||| || || ||||| || || || || || |||||||||||| | || ||||| |
Sbjct 24176 TCGTCAAGACCCTCACTGGCAAGACCATTACTCTCGAGGTGGAATCCAGCGATACCATTG 24235
Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050
| ||||| || ||||| |||||||| || || |||||||| |||||||| || || |
Sbjct 24236 ATAACGTTAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTGA 24295
Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGTCCAAAAA 178109
| ||||| || || ||| | || ||||| | || |||| |||| |||||| | || ||
Sbjct 24296 TTTTCGCTGGCAAGCAGTTGGAGGATGGCCGCAC-CTTGTCCGACTATAACATTCAGAAG 24354
Query 178110 GAATCAACACTGCATCTTGT 178129
||||| || || || || ||
Sbjct 24355 GAATCGACTCTCCACCTCGT 24374
>seq222
Length=253618
Score = 105 bits (116), Expect = 2e-17
Identities = 116/153 (76%), Gaps = 6/153 (4%)
Strand=Plus/Plus
Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985
|||||| || || || || || || || || |||||||| || || ||| |||||
Sbjct 18492 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGC---GACAC 18548
Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045
|||||| |||||||| ||||| |||||||| || || ||||| || |||||||| ||
Sbjct 18549 CATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCG 18608
Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078
|| |||||||| || || ||||| || |||||
Sbjct 18609 CCTGATCTTCGCTGGTAAGCAGCTTGAGGATGG 18641
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203717489125466
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |