Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq405 84.2 2e-11 >seq405 Length=35189 Score = 84.2 bits (92), Expect = 2e-11 Identities = 191/287 (67%), Gaps = 3/287 (1%) Strand=Plus/Minus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 || || ||||||||||| | ||| | || || || |||||||| || ||||| Sbjct 2306 ATGTATGTATCAATCAGCAGGGAGTATGTCTCCGAATGAATGTTCTCAATCATAATCTGG 2247 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591 || || ||||||||||||||||| | | || || || | || || ||| || | Sbjct 2246 AAGCCGTAGAAGCATCGAGCCTCAGGCACCTGCACCTCATTGCTGAAGCGCTCCAACAAG 2187 Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATA- 16650 |||||||| ||||| |||||| ||||| || || || | | || |||||||| Sbjct 2186 TTCTCATTAACGATTCCGTCAGAGGCAGCGAAGAAGGCAAGGACATGAGAGATGAAATAA 2127 Query 16651 --TTTTTCGTCAGATGTAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCT 16708 | |||||| | | | | ||| || | | ||||||||| | ||| | || Sbjct 2126 CGCTCATCGTCATTCAGACGGTTGTTCCAGTCGTGCAGATCTTTGGAGAGATCAATCTCC 2067 Query 16709 TCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAAT 16755 || | ||||| ||| ||| | || || || ||||||| |||||| Sbjct 2066 TCGGCGGTCCAGAAGGAAGCTTCGGCTTTCTTGTACATTTGCCAAAT 2020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511410110511720