Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20var._20RP-
2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq586 208 9e-49
>seq586
Length=168373
Score = 208 bits (230), Expect = 9e-49
Identities = 589/899 (66%), Gaps = 12/899 (1%)
Strand=Plus/Plus
Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010
|||||||| || || |||||| |||| ||||| ||||| || || | || | |
Sbjct 81215 TCAAACTCATCACCATAAACATCTGCCAAACCAGGGGCTTCATTGGGGCAGAACAGAGTC 81274
Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 54070
|| || |||| || ||||| ||||| || |||||||| |||| || || ||
Sbjct 81275 CAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGCGCGTAGAAC 81334
Query 54071 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 54130
||||| | || ||| |||||| || || ||||| |||||| |||||| | |
Sbjct 81335 AGATCACGGGCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAGGAACTCGAAG 81394
Query 54131 ATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCC 54190
||||| | |||||| || || | ||| || | | | | ||||| || ||||| ||||||
Sbjct 81395 ATATCGGCATGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAGGGCGCTTGTTACCTCCC 81454
Query 54191 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 54250
|| || | || ||||| ||||| || | || | | ||| |||| |||||| || ||
Sbjct 81455 TGGTCGACATACCTAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAG 81514
Query 54251 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 54310
| ||||| || || || ||| || ||||||| || || || ||
Sbjct 81515 GACCCATTAGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGGCCG 81574
Query 54311 ATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG-TATCATAGATGCCCTC 54369
|| || || || | || ||||| | || || || |||| | | || ||||| |||||
Sbjct 81575 ATACCGCCAGCTGTCTTCGAGATCATGGCACAA-GTCTTAAGGGTGTCGTAGATACCCTC 81633
Query 54370 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGAC---ATTTGGTGACGACTAGT 54426
|| ||||| ||| |||| | | || || || |||| | ||| | | |||
Sbjct 81634 AATGCTATCCTCCTTCATATCGACGAGGAAGCA---AGACGCAAGCTGGGGTTGGGGAGT 81690
Query 54427 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTA 54486
|| ||||| || | ||||||||||| || || || |||| | ||| | || | |||
Sbjct 81691 ACCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGAGACATGAGGTGGTA 81750
Query 54487 CGTCTCGATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAAC 54544
||||| || || || |||| ||| |||||| || || || |||||||| |||
Sbjct 81751 GGTCTCAATGGCCTTTTCAATAT--TGTTGCCATGAATGCCAACCGCAACACGCATCAAC 81808
Query 54545 ATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAA 54604
| |||||| || | ||| | | |||| || ||| ||||| |||||| || |
Sbjct 81809 AAGTGCTGCGGACGCTCAGCAACCTTGCCATTGATTCGCAGCAGGTAGGACCGCTCGAGT 81868
Query 54605 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGT 54664
|| || ||||| ||| ||||||| ||||| || || || | |||| | ||||||||
Sbjct 81869 GTCTTGAAACCGAAAAAGTTGTAGTTGAAGTCACGATCATATACAATAGCAGAGTTGAGC 81928
Query 54665 TTATCCTTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATCGGAGAATGTTTC 54724
| ||| || ||| | || | || || | ||||| || || | ||| |
Sbjct 81929 TCATCAGCATGTTTCATGACAATTTCATACGTCTCTTTCGAAATCATTGGCGCGGGTTGC 81988
Query 54725 CCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGttttttt 54784
||||| || || ||||||| | | ||| || || | || | || ||
Sbjct 81989 TTGTTTTTGGGGTTAACATAGTGGTACAGGTCCGAGATGACCAGAGAGAACTGCTTCTTG 82048
Query 54785 GTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 54843
|||| ||||| || || || |||||||| | || |||| ||||||||||| || ||
Sbjct 82049 GTTTGCTTGTGGAGGTTGGACACGGCTATACGGGCAGCTAAGATGGCATAATCGGGGTG 82107
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593716620160080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |