Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq596 176 5e-39 >seq596 Length=181484 Score = 176 bits (194), Expect = 5e-39 Identities = 410/613 (67%), Gaps = 33/613 (5%) Strand=Plus/Minus Query 145681 TTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGA-AGTC 145739 ||||| | || || |||| || || || ||||| || |||| | || || | ||| Sbjct 64569 TTCAGCGCGTCGACATGGTCCAGATACACATGCGCATCACCCATGGTATGAATCAGAGTG 64510 Query 145740 CCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTAT 145799 || ||| || || |||| ||||| | || | |||||||| | || || || Sbjct 64509 CCGGGGTTC-AGATCCGTCGCATGGGCCAGTATATGCGTCAGCAGCGCATACGACGCAAT 64451 Query 145800 GTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAG-CT 145858 |||||| ||||| || |||||||| || | ||| || || |||||| | || || || || Sbjct 64450 GTTGAATGGCACACCAAGCCCCATATCGCACGAACGTTGATACAGCAGACACGATAGGCT 64391 Query 145859 CCCCG------CCCGCC--------------ACGTAGAACTG-GCACAGGAGGTGGCAGG 145897 |||| || ||| || |||||||| ||| | | || |||| Sbjct 64390 CCCCTTGTTGTCCAGCCCATTAGGATATGAGACATAGAACTGCGCAAAC-ATATGACAGG 64332 Query 145898 GCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGC 145957 |||| || ||||| ||| |||||||||||||| || | | || || | | || Sbjct 64331 GCGGGAGCGCCATCTTCTTCAGATCCGCCGGGTTCCACGCACTCATGATGA---TGCGGC 64275 Query 145958 TCTC----GGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGC 146013 || || ||| || || | || | | | ||| ||||||||| |||||||| Sbjct 64274 GGTCAAAGGGCGTTTCT-TTCAGCTTGCGCACAACCTCCGCGAGCTGGTCGACGCCCTGG 64216 Query 146014 CCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCG 146073 || |||||| ||||||| ||| | |||| |||||||||| |||| |||||||||||| Sbjct 64215 CCTGTGTAATCCGTCTTGGCGTCGATGTACTCGGCCCCGAAATGCCGCCACTGGAACCCA 64156 Query 146074 TAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCC 146133 || || || || || || ||| ||| | |||||| ||||| | | | ||||| || Sbjct 64155 TACACAGGGCCTAGATCGCCGACCTCGCGGTGCCCGAGCCCAACTTTGTCCAGGAACTCG 64096 Query 146134 CGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTG 146193 ||| ||||| |||||||||| |||| ||| | ||||| ||||| ||| Sbjct 64095 CGGCTGCCGTTACCGTCCCAGATTTTGATGCCTGCTTCCGAGAGGGGGATGGAGGAGGTG 64036 Query 146194 GACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTG 146253 | || |||||||||||| ||||| ||| ||| | | | ||| || | |||||| Sbjct 64035 CATCCGGAGATGAACCAGAGGAGCTCGGCGATGACGGCACGCAGGAAAACGCGTTTGGTG 63976 Query 146254 GTCAGCAGGGGGA 146266 || || ||||||| Sbjct 63975 GTGAGGAGGGGGA 63963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590071850730840