Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq405 156 4e-33 seq630 122 9e-23 seq615 118 1e-21 seq606 107 2e-18 >seq405 Length=35189 Score = 156 bits (172), Expect = 4e-33 Identities = 189/257 (74%), Gaps = 3/257 (1%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| || ||||| || || |||||||||| ||||||| | || || Sbjct 2020 ATTTGGCAAATGTACAAGAAAGCCGAAGCTTCCTTCTGGACCGCCGAGGAGATTGATCTC 2079 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||||| || | ||||||| | || |||| ||| | ||||| |||||||| Sbjct 2080 TCCAAAGATCTGCACGACTGGAACAACCGTCTGAATGACGATGAGCGTTATTTCATCTCT 2139 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 || || || ||||| ||||| ||| ||||| ||||| || ||||| || | ||||| Sbjct 2140 CATGTCCTTGCCTTCTTCGCTGCCTCTGACGGAATCGTTAATGAGAACTTGTTGGAGCGC 2199 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | |||||||||||| | ||||| || |||||||||||||| ||||| || Sbjct 2200 TTCAGCAATGAGGTGCAGGTGCCTGAGGCTCGATGCTTCTACGGCTTCCAGATTATGATT 2259 Query 116873 GAGAACGTGCACTCGGA 116889 |||||| | || ||||| Sbjct 2260 GAGAACATTCATTCGGA 2276 Score = 118 bits (130), Expect = 1e-21 Identities = 151/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||| ||||||| || | ||||| | | | || | | |||| |||||| Sbjct 2421 AGAAGGCCCAGTGGGCCATGAGATGGATTTCTGATAAGGAATCTACTTTCGCTCAGCGCC 2480 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 | ||||||||||| || || ||||| |||| || || || ||| || |||| || | Sbjct 2481 TTGTGGCCTTCGCCGCTGTGGAGGGAATCTTTTTCTCTGGATCTTTTGCTTCCATCTTCT 2540 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||| ||||| || ||| | ||||| || || |||||| ||||||||||||||| | | Sbjct 2541 GGCTGAAGAAGCGTGGCTTGATGCCTGGTCTCACTTTCTCCAACGAGCTCATCTCTCGTG 2600 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTG 117189 ||||||| || || |||||||| || Sbjct 2601 ACGAGGGACTACACACAGACTTTGCTTG 2628 >seq630 Length=388802 Score = 122 bits (134), Expect = 9e-23 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| || || ||||| ||| | || || || || || Sbjct 62572 ATGCAGATCTTCGTCAAGACTCTCACCGGAAAGACCATTACCCTGGAGGTGGAGTCCTCC 62631 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || |||| | ||| || || | ||||| ||||||||||| | ||||| Sbjct 62632 GACACGATTGACAACG-TGAAGAGCAAGATCCAAGACAAGGAGGGCATCCCTCCTGACCA 62690 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || || ||| |||| || | | | |||||| ||| ||||| Sbjct 62691 GCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGGAGGACCCTCTCCGATTACAA 62750 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 || || |||||| |||||| || || ||| |||| Sbjct 62751 TATTCAAAAGGAGAGCACGCTCCACCTGGTGCTGCG 62786 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||||||||| ||||||||| | || ||||| ||| | Sbjct 61808 ATGCAGATTTTCGTCAAGACTCTCACGGGCAAGACCATCACCTTGGAGGTCGAGTCCAGC 61867 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | ||||| || |||| || || ||||| ||||| | |||||| Sbjct 61868 GACACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCAG 61927 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | || | ||| ||||| ||||| || || | ||||| || ||| || ||| Sbjct 61928 CAGCGCTTGATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTTTCCGATTATAAC 61987 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||| | || ||||| || || Sbjct 61988 ATCCAGAAGGAATCTACTCTGCACCTGGT 62016 >seq615 Length=220600 Score = 118 bits (130), Expect = 1e-21 Identities = 137/182 (75%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || ||||| || || || ||| ||||||| || | | ||||| | | Sbjct 21041 TTCGTCAAGACCCTGACGGGTAAGACTATTACCCTCGACGTTGAGTCGAGCGACACCATC 21100 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| |||||| || || | ||||| ||||| |||||| | |||||||| || || Sbjct 21101 GACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCT 21159 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| || || ||||| || || | |||||||| | |||||||||||| ||||| Sbjct 21160 GATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATTCAGAA 21219 Query 40878 GG 40879 || Sbjct 21220 GG 21221 >seq606 Length=198141 Score = 107 bits (118), Expect = 2e-18 Identities = 94/117 (80%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||| |||||| | |||||||| || || |||| ||| ||||| ||||| || Sbjct 90918 GACAAGGAGGGAATCCCCCCCGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAG 90859 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||| || |||||| ||||||||||||||||||||| | || ||||| || ||| Sbjct 90858 GACGGTCGTACCCTCTCTGACTACAACATCCAGAAGGAGTCGACCCTGCACCTCGTG 90802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515214878598960