Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20var._20RP-
2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq405 156 4e-33
seq630 122 9e-23
seq615 118 1e-21
seq606 107 2e-18
>seq405
Length=35189
Score = 156 bits (172), Expect = 4e-33
Identities = 189/257 (74%), Gaps = 3/257 (1%)
Strand=Plus/Plus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| || ||||| || || |||||||||| ||||||| | || ||
Sbjct 2020 ATTTGGCAAATGTACAAGAAAGCCGAAGCTTCCTTCTGGACCGCCGAGGAGATTGATCTC 2079
Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752
||||| || | ||||||| | || |||| ||| | ||||| ||||||||
Sbjct 2080 TCCAAAGATCTGCACGACTGGAACAACCGTCTGAATGACGATGAGCGTTATTTCATCTCT 2139
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
|| || || ||||| ||||| ||| ||||| ||||| || ||||| || | |||||
Sbjct 2140 CATGTCCTTGCCTTCTTCGCTGCCTCTGACGGAATCGTTAATGAGAACTTGTTGGAGCGC 2199
Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872
||| | |||||||||||| | ||||| || |||||||||||||| ||||| ||
Sbjct 2200 TTCAGCAATGAGGTGCAGGTGCCTGAGGCTCGATGCTTCTACGGCTTCCAGATTATGATT 2259
Query 116873 GAGAACGTGCACTCGGA 116889
|||||| | || |||||
Sbjct 2260 GAGAACATTCATTCGGA 2276
Score = 118 bits (130), Expect = 1e-21
Identities = 151/208 (73%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041
|||||||| ||||||| || | ||||| | | | || | | |||| ||||||
Sbjct 2421 AGAAGGCCCAGTGGGCCATGAGATGGATTTCTGATAAGGAATCTACTTTCGCTCAGCGCC 2480
Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101
| ||||||||||| || || ||||| |||| || || || ||| || |||| || |
Sbjct 2481 TTGTGGCCTTCGCCGCTGTGGAGGGAATCTTTTTCTCTGGATCTTTTGCTTCCATCTTCT 2540
Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161
|||| ||||| || ||| | ||||| || || |||||| ||||||||||||||| | |
Sbjct 2541 GGCTGAAGAAGCGTGGCTTGATGCCTGGTCTCACTTTCTCCAACGAGCTCATCTCTCGTG 2600
Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTG 117189
||||||| || || |||||||| ||
Sbjct 2601 ACGAGGGACTACACACAGACTTTGCTTG 2628
>seq630
Length=388802
Score = 122 bits (134), Expect = 9e-23
Identities = 158/216 (73%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||| || || ||||| ||| | || || || || ||
Sbjct 62572 ATGCAGATCTTCGTCAAGACTCTCACCGGAAAGACCATTACCCTGGAGGTGGAGTCCTCC 62631
Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | || |||| | ||| || || | ||||| ||||||||||| | |||||
Sbjct 62632 GACACGATTGACAACG-TGAAGAGCAAGATCCAAGACAAGGAGGGCATCCCTCCTGACCA 62690
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || ||||||| ||| || || ||| |||| || | | | |||||| ||| |||||
Sbjct 62691 GCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGGAGGACCCTCTCCGATTACAA 62750
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
|| || |||||| |||||| || || ||| ||||
Sbjct 62751 TATTCAAAAGGAGAGCACGCTCCACCTGGTGCTGCG 62786
Score = 116 bits (128), Expect = 4e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||||||||| ||||||||| | || ||||| ||| |
Sbjct 61808 ATGCAGATTTTCGTCAAGACTCTCACGGGCAAGACCATCACCTTGGAGGTCGAGTCCAGC 61867
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | ||||| || |||| || || ||||| ||||| | ||||||
Sbjct 61868 GACACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCAG 61927
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || | || | ||| ||||| ||||| || || | ||||| || ||| || |||
Sbjct 61928 CAGCGCTTGATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTTTCCGATTATAAC 61987
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||||||||| | || ||||| || ||
Sbjct 61988 ATCCAGAAGGAATCTACTCTGCACCTGGT 62016
>seq615
Length=220600
Score = 118 bits (130), Expect = 1e-21
Identities = 137/182 (75%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || || ||||| || || || ||| ||||||| || | | ||||| | |
Sbjct 21041 TTCGTCAAGACCCTGACGGGTAAGACTATTACCCTCGACGTTGAGTCGAGCGACACCATC 21100
Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817
| |||| |||||| || || | ||||| ||||| |||||| | |||||||| || ||
Sbjct 21101 GACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCT 21159
Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877
|||| ||| || || ||||| || || | |||||||| | |||||||||||| |||||
Sbjct 21160 GATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATTCAGAA 21219
Query 40878 GG 40879
||
Sbjct 21220 GG 21221
>seq606
Length=198141
Score = 107 bits (118), Expect = 2e-18
Identities = 94/117 (80%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| ||||| |||||| | |||||||| || || |||| ||| ||||| ||||| ||
Sbjct 90918 GACAAGGAGGGAATCCCCCCCGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAG 90859
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|||| || |||||| ||||||||||||||||||||| | || ||||| || |||
Sbjct 90858 GACGGTCGTACCCTCTCTGACTACAACATCCAGAAGGAGTCGACCCTGCACCTCGTG 90802
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515214878598960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |