Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20var._20RP-
2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq630 120 3e-22
seq615 100 2e-16
seq606 86.0 5e-12
>seq630
Length=388802
Score = 120 bits (132), Expect = 3e-22
Identities = 153/211 (73%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||| | ||||| || || || ||||| |||||| | |||||| |||||||
Sbjct 62016 ACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAATCGGAAAGAGTGCGGCCATCCTCG 61957
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || |||||| | || | |||||||| || ||||| || |||||||| || |
Sbjct 61956 AGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAGGAGGGATACCCTCCTTATCCTGA 61897
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | || | ||||| || ||||||||| | ||| | || |||
Sbjct 61896 ATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGACCTCCAAGGTGATGGTCTTG 61837
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATGG 118740
|| || ||||| || || |||||||||||||
Sbjct 61836 CCCGTGAGAGTCTTGACGAAAATCTGCATGG 61806
Score = 120 bits (132), Expect = 3e-22
Identities = 155/214 (72%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||||| ||||| || ||| |||||||| ||||||||| | || | | |||
Sbjct 62784 CAGCACCAGGTGGAGCGTGCTCTCCTTTTGAATATTGTAATCGGAGAGGGTCCTCCCATC 62725
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| | ||| || |||||| |||||||||||||||| || ||||| ||||||||||||||
Sbjct 62724 TTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTC 62665
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
| || || || || | || | ||||| | | ||| ||||| | ||| | ||
Sbjct 62664 TTGGATCTTGCTCTTCACGTTGTCAATCGTGTCGGAGGACTCCACCTCCAGGGTAATGGT 62605
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|| ||||| ||||| || || || |||||||||
Sbjct 62604 CTTTCCGGTGAGAGTCTTGACGAAGATCTGCATG 62571
Score = 86.0 bits (94), Expect = 5e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || || || || |||||||| || ||| || ||||| |||||| | |||
Sbjct 62319 GTGGAGAGTCGATTCCTTCTGAATGTTATAGTCGGACAAGGTGCGGCCATCCTCCAACTG 62260
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| |||||| | || ||||||||||| || ||||| || ||||||||||| || ||
Sbjct 62259 CTTGCCAGCGAAAATCAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTT 62200
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
||||| | || | ||| || || || ||||||| || | || ||||| ||
Sbjct 62199 CGACTTAACGTTATCAATGGTATCGCTGGATTCCACCTCGAGAGTAATGGTCTTGCCAGT 62140
Query 118715 CAGAGTTTTTAC 118726
|| || || ||
Sbjct 62139 GAGGGTCTTGAC 62128
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| || | ||| || || ||||| || |||||||| || || || ||| ||
Sbjct 62552 ACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAATCAGACAAGGTACGGCCATCTTCA 62493
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|| || |||||||| ||||||||||||| ||||| ||||| || |||||||| ||
Sbjct 62492 AGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCAGGAGGGATACCCTCCTTATCCTGG 62433
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| |||||| | ||| || || | || | || ||
Sbjct 62432 ATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCTACTTCTAATGTGATAGTCTTT 62373
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || ||||| || || || || |||||
Sbjct 62372 CCCGTGAGAGTCTTAACGAAGATTTGCAT 62344
>seq615
Length=220600
Score = 100 bits (110), Expect = 2e-16
Identities = 130/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| ||||||||||| ||||||| ||||| |||||| ||||| || |||||| ||||
Sbjct 21219 TTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 21160
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670
|| |||||||| || || || || ||||||||||| || || || || | |||
Sbjct 21159 AGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 21100
Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 118730
| |||||| | ||| || |||| ||| | || || || ||||| || || || |||
Sbjct 21099 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATAGTCTTACCCGTCAGGGTCTTGACGAAA 21040
>seq606
Length=198141
Score = 86.0 bits (94), Expect = 5e-12
Identities = 91/120 (76%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||| | ||| | || ||||| || || |||||||| || | || || |||||
Sbjct 90802 CACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGACCGTCCTC 90861
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||| || |||||| |||| ||||||||||| ||||| || || ||||||||||||||
Sbjct 90862 GAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCGGGGGGGATTCCCTCCTTGTCTGT 90921
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433826852216332
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |