Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq630 105 5e-18 seq615 96.9 3e-15 >seq630 Length=388802 Score = 105 bits (116), Expect = 5e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| |||||| || |||||||| ||||| || ||| || ||| | || || Sbjct 62016 ACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAATCGGAAAGAGTGCGGCCATCCTCG 61957 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || ||||| ||||| ||||| ||||| ||||| | ||||||||| ||| | Sbjct 61956 AGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAGGAGGGATACCCTCCTTATCCTGA 61897 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | |||| | ||| ||||||| ||| || |||||| Sbjct 61896 ATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGACCTCCAAGGTGATGGTCTTG 61837 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 ||||| |||||||| || || || |||||| || Sbjct 61836 CCCGTGAGAGTCTTGACGAAAATCTGCATGGTG 61804 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 |||||||||||||| |||||| || ||| | || |||| || || || ||||| Sbjct 62306 TCCTTCTGAATGTTATAGTCGGACAAGGTGCGGCCATCCTCCAACTGCTTGCCAGCGAAA 62247 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 |||| ||||| ||||| ||||| | ||||||||||||| || || |||||| Sbjct 62246 ATCAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTAACGTTA 62187 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | | || | |||||||| | ||||| |||||||| || || ||||| || Sbjct 62186 TCAATGGTATCGCTGGATTCCACCTCGAGAGTAATGGTCTTGCCAGTGAGGGTCTTGAC 62128 >seq615 Length=220600 Score = 96.9 bits (106), Expect = 3e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 45147 CCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATA 45206 |||||||||||||||||||| |||| ||| | || || || || || || ||||| | Sbjct 21221 CCTTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 21162 Query 45207 TCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCG 45266 ||| ||||| ||||| || || | ||||||||||||| || || ||| || Sbjct 21161 TCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGT 21102 Query 45267 CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAA 45326 | | | |||| | ||| || || | |||||| ||||| |||||||| ||||| || | Sbjct 21101 CGATGGTGTCGCTCGACTCAACGTCGAGGGTAATAGTCTTACCCGTCAGGGTCTTGACGA 21042 Query 45327 A 45327 | Sbjct 21041 A 21041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395071969149091