Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq586 199 4e-46 seq630 105 6e-18 seq615 86.0 6e-12 >seq586 Length=168373 Score = 199 bits (220), Expect = 4e-46 Identities = 430/639 (67%), Gaps = 8/639 (1%) Strand=Plus/Plus Query 23342 TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGC 23401 ||||| || |||| || ||||| || |||| || ||||||||||| || ||||| | Sbjct 81290 TCAACTCGCTTCATGAACAGATCAGGGGTCCACAGCGCGTAGAACAGATCACGGGCTCTG 81349 Query 23402 ACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCAC 23461 || ||||| || ||| |||||| | ||||| || || || | || |||||||| Sbjct 81350 ACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAGGAACTCGAAGATATCGGCATGCCAA 81409 Query 23462 GGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGG 23521 ||||||||||||| ||||| ||||| || | ||| || || ||||| ||||| || | Sbjct 81410 GGCTCGAGGTAAATAGCAAAAGCGCCAGGGCGCTTGTTACCTCCCTGGTCGACATACCTA 81469 Query 23522 GCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCC 23581 || ||||||||| |||| | ||||| || || | |||||| || | || || || Sbjct 81470 GCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGA-GGACCCATTAGTGCC 81528 Query 23582 GCCACACT-CGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640 ||| | || ||| | || || | | |||||||| | || || || || | | Sbjct 81529 ACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGGCCGATACCGCCAGCTGT 81588 Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700 ||||| ||||| || || || || ||||||||||| ||||| ||||| ||||| || Sbjct 81589 CTTCGAGATCATGGCACAAGTCTTAAGGGTGTCGTAGATACCCTCAATGCTATCCTCCTT 81648 Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760 | |||| | ||| || || | | || | || ||| ||| | || |||||| || Sbjct 81649 CATATCGACGAGGAAGCAAGACGCAAGCTGGGGTTGGGGAGTACCAGCATTGAACAGAGT 81708 Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820 || || || || |||||| | ||||| || | ||| || || ||||| || Sbjct 81709 AGGAGAAGCATGAGTGAAGTATTTCTGAGACATGAGGTGGTAGGTCTCAATGGCCTTTTC 81768 Query 23821 AATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCT---C 23877 ||| | | || || || || | || || ||||||| || || || || | || | Sbjct 81769 AATATTGTTGCCATGAATGCCAACCGCAACACGCATCAACAAGTGCTGCGGACGCTCAGC 81828 Query 23878 GACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATA 23937 ||| | ||| || ||| | ||| || || || | | || || || || ||| | Sbjct 81829 AACCTT---GCCATTGATTCGCAGCAGGTAGGACCGCTCGAGTGTCTTGAAACCGAAAAA 81885 Query 23938 GTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976 || ||||| ||||||||||| | || || || || || Sbjct 81886 GTTGTAGTTGAAGTCACGATCATATACAATAGCAGAGTT 81924 Score = 120 bits (132), Expect = 3e-22 Identities = 441/678 (65%), Gaps = 17/678 (3%) Strand=Plus/Plus Query 22109 TCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCCGTC 22168 || || |||||||| |||| | ||| | |||| || || || ||||| || ||| Sbjct 80003 TCAACAGTAAACTGGATGGGAGCGGAGGCAGCCATGGTACGCAGGTAGTACATTCCAGTC 80062 Query 22169 TTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGCAAG 22228 |||| |||||| |||||| | ||| || || || | || || | | ||| Sbjct 80063 TTCAAACCCATTTTCCACCCAGCAAAGTGCATACTGGTGAGCTTGCCCATAGTAGGCTCC 80122 Query 22229 TCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCATA 22288 | || || | |||| || ||| ||| || || || || || || ||||||||||| Sbjct 80123 TTCAGGTGAATGTTGAGAGATTGAGACTGGTCAATGAAAGCACCACGGTCGGCGGCCATC 80182 Query 22289 TTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCTAAC 22348 | | | ||||| || |||||||| ||||||||||| || | |||| || Sbjct 80183 TGCAGGATGGTACGTTGGGAGATTTCCCACACGGTCTTGTAGAGAGCCTTGATGTCGGCG 80242 Query 22349 GGTATCGATTCGA-TCCTCTGGACGGACCCGTTAT-TGTGTATGATCAAATTTTTAATCG 22406 || || | | || | | || ||||| || || || | ||||| ||||| || Sbjct 80243 GGAAT-GTTGGGAATGTTTTGAACGGAGCCACCATCTGCG-ATGATACGGTTTTTCATGT 80300 Query 22407 TATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGAA 22466 | || ||||| ||| | | || | ||| |||| || | |||| || || || | Sbjct 80301 TGTCCGACCACAGACCAAGGTCGACAAGATCCTTGAGAAGCCAAGGGTTAACGACCTGGA 80360 Query 22467 ACTCGCCGGACAAGA-CGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCA 22525 |||| || | ||||| | ||||| ||| ||||| || ||| | || || ||| |||| Sbjct 80361 ACTCACCAG-CAAGAACACGGCGAGAGTAGATGTTCGAGGTGTAAGGCTCAAAACATTCG 80419 Query 22526 TTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTT 22585 ||| ||||| ||||| ||| ||||| |||||||| |||| || | ||| Sbjct 80420 TTGAAGCCCAGAATCTGGCTGGTGCTTGCGGTGGGCATCGGTGCCACCAACAAACTGTTA 80479 Query 22586 CTCAAGCCGTGCTTTGAAATTTTACTCTT--GAGCATCGACCAGTCCCACAGATCGGACG 22643 | | ||||||| | ||| || ||| ||| ||| ||||||||| || || | | Sbjct 80480 CGAACACCGTGCTGGGCAATCTTCGCCTTCAGAGAATC--CCAGTCCCAGAGGTCCGTGG 80537 Query 22644 GCGTCACATTGTCCCACATATCGTATTG--CAACACGCCGCGACTCGCCGGGCTGCCTTC 22701 | || ||||||||||||| || || || || | | || || ||| ||| || Sbjct 80538 GGGTTC---TGTCCCACATATCATACTGGAGAATACCCTGAGAGACG--GGGGAGCCCTC 80592 Query 22702 GTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTA 22761 ||| ||||| || |||||| | | ||| || || || || ||| || |||| Sbjct 80593 GTAGGTTTCATAAGGACCAAACTCCTTGGCCAGCTCACAAGATGCAGTCAAAGCACCGTG 80652 Query 22762 ATATATAGTCTCGAAGAT 22779 ||| || ||||| ||||| Sbjct 80653 ATAGATGGTCTCAAAGAT 80670 >seq630 Length=388802 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| |||||||| |||||||| || ||||| || |||||| | || || || | Sbjct 61807 CATGCAGATTTTCGTCAAGACTCTCACGGGCAAGACCATCACCTTGGAGGTCGAGTCCAG 61866 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | | || | ||||| || || ||| ||||| || | || || ||||| Sbjct 61867 CGACACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCA 61926 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| | || ||||||||||| ||| | || || ||| | ||||||||| Sbjct 61927 GCAGCGCTTGATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTTTCCGATTATAA 61986 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || ||||| ||||| || ||||| || Sbjct 61987 CATCCAGAAGGAATCTACTCTGCACCTGGTTCT 62019 Score = 98.7 bits (108), Expect = 9e-16 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||| ||||| || || ||||| || || || |||| || ||| | ||| | | | Sbjct 62126 TCGTCAAGACCCTCACTGGCAAGACCATTACTCTCGAGGTGGAATCCAGCGATACCATTG 62185 Query 31263 AAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAA 31322 | | || || || || ||||||||| || | || || |||||||||||||| | Sbjct 62186 ATAACGTTAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTGA 62245 Query 31323 TATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAG 31382 | ||||||||||| |||||||| || || || ||| ||||||||||| || | Sbjct 62246 TTTTCGCTGGCAAGCAGTTGGAGGATGGCCGCACCTTGTCCGACTATAACATTCAGAAGG 62305 Query 31383 AATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||||| || || || ||| | || | || |||| Sbjct 62306 AATCGACTCTCCACCTCGTCCTTCGTCTTCGTGGTGGTA 62344 Score = 98.7 bits (108), Expect = 9e-16 Identities = 153/216 (71%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| |||||||| || || || || || ||| | || || || | || Sbjct 62571 CATGCAGATCTTCGTCAAGACTCTCACCGGAAAGACCATTACCCTGGAGGTGGAGTCCTC 62630 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAG-AATAGCG--GACAAGGAAGGCGTGCCGCCCGA 31308 ||||| | || | || || ||| || | | |||||||| ||| | || || || Sbjct 62631 CGACACGATTGACAACGTGAA---GAGCAAGATCCAAGACAAGGAGGGCATCCCTCCTGA 62687 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 |||||||||||| || |||||||| || ||||||||||| | ||| | |||||| Sbjct 62688 CCAGCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGGAGGACCCTCTCCGATTA 62747 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || |||||||| || || || || ||||| || Sbjct 62748 CAATATTCAAAAGGAGAGCACGCTCCACCTGGTGCT 62783 >seq615 Length=220600 Score = 86.0 bits (94), Expect = 6e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 |||||| ||||| ||||| || || || || ||| |||||||||| || ||||| | Sbjct 21040 TTTCGTCAAGACCCTGACGGGTAAGACTATTACCCTCGACGTTGAGTCGAGCGACACCAT 21099 Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 ||| | ||||| | || ||||||||| || | || || ||||||||||| || Sbjct 21100 CGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCT 21159 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380 || |||||||| || ||| | || || || ||||||| || |||||||| || Sbjct 21160 GATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATTCAGAA 21219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445762661134320