Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20var._20RP-
2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq586 199 4e-46
seq630 105 6e-18
seq615 86.0 6e-12
>seq586
Length=168373
Score = 199 bits (220), Expect = 4e-46
Identities = 430/639 (67%), Gaps = 8/639 (1%)
Strand=Plus/Plus
Query 23342 TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGC 23401
||||| || |||| || ||||| || |||| || ||||||||||| || ||||| |
Sbjct 81290 TCAACTCGCTTCATGAACAGATCAGGGGTCCACAGCGCGTAGAACAGATCACGGGCTCTG 81349
Query 23402 ACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCAC 23461
|| ||||| || ||| |||||| | ||||| || || || | || ||||||||
Sbjct 81350 ACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAGGAACTCGAAGATATCGGCATGCCAA 81409
Query 23462 GGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGG 23521
||||||||||||| ||||| ||||| || | ||| || || ||||| ||||| || |
Sbjct 81410 GGCTCGAGGTAAATAGCAAAAGCGCCAGGGCGCTTGTTACCTCCCTGGTCGACATACCTA 81469
Query 23522 GCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCC 23581
|| ||||||||| |||| | ||||| || || | |||||| || | || || ||
Sbjct 81470 GCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGA-GGACCCATTAGTGCC 81528
Query 23582 GCCACACT-CGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640
||| | || ||| | || || | | |||||||| | || || || || | |
Sbjct 81529 ACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGGCCGATACCGCCAGCTGT 81588
Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700
||||| ||||| || || || || ||||||||||| ||||| ||||| ||||| ||
Sbjct 81589 CTTCGAGATCATGGCACAAGTCTTAAGGGTGTCGTAGATACCCTCAATGCTATCCTCCTT 81648
Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760
| |||| | ||| || || | | || | || ||| ||| | || |||||| ||
Sbjct 81649 CATATCGACGAGGAAGCAAGACGCAAGCTGGGGTTGGGGAGTACCAGCATTGAACAGAGT 81708
Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820
|| || || || |||||| | ||||| || | ||| || || ||||| ||
Sbjct 81709 AGGAGAAGCATGAGTGAAGTATTTCTGAGACATGAGGTGGTAGGTCTCAATGGCCTTTTC 81768
Query 23821 AATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCT---C 23877
||| | | || || || || | || || ||||||| || || || || | || |
Sbjct 81769 AATATTGTTGCCATGAATGCCAACCGCAACACGCATCAACAAGTGCTGCGGACGCTCAGC 81828
Query 23878 GACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATA 23937
||| | ||| || ||| | ||| || || || | | || || || || ||| |
Sbjct 81829 AACCTT---GCCATTGATTCGCAGCAGGTAGGACCGCTCGAGTGTCTTGAAACCGAAAAA 81885
Query 23938 GTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976
|| ||||| ||||||||||| | || || || || ||
Sbjct 81886 GTTGTAGTTGAAGTCACGATCATATACAATAGCAGAGTT 81924
Score = 120 bits (132), Expect = 3e-22
Identities = 441/678 (65%), Gaps = 17/678 (3%)
Strand=Plus/Plus
Query 22109 TCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCCGTC 22168
|| || |||||||| |||| | ||| | |||| || || || ||||| || |||
Sbjct 80003 TCAACAGTAAACTGGATGGGAGCGGAGGCAGCCATGGTACGCAGGTAGTACATTCCAGTC 80062
Query 22169 TTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGCAAG 22228
|||| |||||| |||||| | ||| || || || | || || | | |||
Sbjct 80063 TTCAAACCCATTTTCCACCCAGCAAAGTGCATACTGGTGAGCTTGCCCATAGTAGGCTCC 80122
Query 22229 TCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCATA 22288
| || || | |||| || ||| ||| || || || || || || |||||||||||
Sbjct 80123 TTCAGGTGAATGTTGAGAGATTGAGACTGGTCAATGAAAGCACCACGGTCGGCGGCCATC 80182
Query 22289 TTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCTAAC 22348
| | | ||||| || |||||||| ||||||||||| || | |||| ||
Sbjct 80183 TGCAGGATGGTACGTTGGGAGATTTCCCACACGGTCTTGTAGAGAGCCTTGATGTCGGCG 80242
Query 22349 GGTATCGATTCGA-TCCTCTGGACGGACCCGTTAT-TGTGTATGATCAAATTTTTAATCG 22406
|| || | | || | | || ||||| || || || | ||||| ||||| ||
Sbjct 80243 GGAAT-GTTGGGAATGTTTTGAACGGAGCCACCATCTGCG-ATGATACGGTTTTTCATGT 80300
Query 22407 TATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGAA 22466
| || ||||| ||| | | || | ||| |||| || | |||| || || || |
Sbjct 80301 TGTCCGACCACAGACCAAGGTCGACAAGATCCTTGAGAAGCCAAGGGTTAACGACCTGGA 80360
Query 22467 ACTCGCCGGACAAGA-CGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCA 22525
|||| || | ||||| | ||||| ||| ||||| || ||| | || || ||| ||||
Sbjct 80361 ACTCACCAG-CAAGAACACGGCGAGAGTAGATGTTCGAGGTGTAAGGCTCAAAACATTCG 80419
Query 22526 TTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTT 22585
||| ||||| ||||| ||| ||||| |||||||| |||| || | |||
Sbjct 80420 TTGAAGCCCAGAATCTGGCTGGTGCTTGCGGTGGGCATCGGTGCCACCAACAAACTGTTA 80479
Query 22586 CTCAAGCCGTGCTTTGAAATTTTACTCTT--GAGCATCGACCAGTCCCACAGATCGGACG 22643
| | ||||||| | ||| || ||| ||| ||| ||||||||| || || | |
Sbjct 80480 CGAACACCGTGCTGGGCAATCTTCGCCTTCAGAGAATC--CCAGTCCCAGAGGTCCGTGG 80537
Query 22644 GCGTCACATTGTCCCACATATCGTATTG--CAACACGCCGCGACTCGCCGGGCTGCCTTC 22701
| || ||||||||||||| || || || || | | || || ||| ||| ||
Sbjct 80538 GGGTTC---TGTCCCACATATCATACTGGAGAATACCCTGAGAGACG--GGGGAGCCCTC 80592
Query 22702 GTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTA 22761
||| ||||| || |||||| | | ||| || || || || ||| || ||||
Sbjct 80593 GTAGGTTTCATAAGGACCAAACTCCTTGGCCAGCTCACAAGATGCAGTCAAAGCACCGTG 80652
Query 22762 ATATATAGTCTCGAAGAT 22779
||| || ||||| |||||
Sbjct 80653 ATAGATGGTCTCAAAGAT 80670
>seq630
Length=388802
Score = 105 bits (116), Expect = 6e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| |||||||| |||||||| || ||||| || |||||| | || || || |
Sbjct 61807 CATGCAGATTTTCGTCAAGACTCTCACGGGCAAGACCATCACCTTGGAGGTCGAGTCCAG 61866
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
||||| | | || | ||||| || || ||| ||||| || | || || |||||
Sbjct 61867 CGACACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCA 61926
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||||| | || ||||||||||| ||| | || || ||| | |||||||||
Sbjct 61927 GCAGCGCTTGATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTTTCCGATTATAA 61986
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||| || || ||||| ||||| || ||||| ||
Sbjct 61987 CATCCAGAAGGAATCTACTCTGCACCTGGTTCT 62019
Score = 98.7 bits (108), Expect = 9e-16
Identities = 153/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262
|||| ||||| || || ||||| || || || |||| || ||| | ||| | | |
Sbjct 62126 TCGTCAAGACCCTCACTGGCAAGACCATTACTCTCGAGGTGGAATCCAGCGATACCATTG 62185
Query 31263 AAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAA 31322
| | || || || || ||||||||| || | || || |||||||||||||| |
Sbjct 62186 ATAACGTTAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTGA 62245
Query 31323 TATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAG 31382
| ||||||||||| |||||||| || || || ||| ||||||||||| || |
Sbjct 62246 TTTTCGCTGGCAAGCAGTTGGAGGATGGCCGCACCTTGTCCGACTATAACATTCAGAAGG 62305
Query 31383 AATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||||| || || || ||| | || | || ||||
Sbjct 62306 AATCGACTCTCCACCTCGTCCTTCGTCTTCGTGGTGGTA 62344
Score = 98.7 bits (108), Expect = 9e-16
Identities = 153/216 (71%), Gaps = 6/216 (3%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || ||||| |||||||| || || || || || ||| | || || || | ||
Sbjct 62571 CATGCAGATCTTCGTCAAGACTCTCACCGGAAAGACCATTACCCTGGAGGTGGAGTCCTC 62630
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAG-AATAGCG--GACAAGGAAGGCGTGCCGCCCGA 31308
||||| | || | || || ||| || | | |||||||| ||| | || || ||
Sbjct 62631 CGACACGATTGACAACGTGAA---GAGCAAGATCCAAGACAAGGAGGGCATCCCTCCTGA 62687
Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368
|||||||||||| || |||||||| || ||||||||||| | ||| | ||||||
Sbjct 62688 CCAGCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGGAGGACCCTCTCCGATTA 62747
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|| |||||||| || || || || ||||| ||
Sbjct 62748 CAATATTCAAAAGGAGAGCACGCTCCACCTGGTGCT 62783
>seq615
Length=220600
Score = 86.0 bits (94), Expect = 6e-12
Identities = 127/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260
|||||| ||||| ||||| || || || || ||| |||||||||| || ||||| |
Sbjct 21040 TTTCGTCAAGACCCTGACGGGTAAGACTATTACCCTCGACGTTGAGTCGAGCGACACCAT 21099
Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320
||| | ||||| | || ||||||||| || | || || ||||||||||| ||
Sbjct 21100 CGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCT 21159
Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380
|| |||||||| || ||| | || || || ||||||| || |||||||| ||
Sbjct 21160 GATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATTCAGAA 21219
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445762661134320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |