Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq405 125 1e-23 seq586 116 7e-21 >seq405 Length=35189 Score = 125 bits (138), Expect = 1e-23 Identities = 330/495 (67%), Gaps = 18/495 (4%) Strand=Plus/Plus Query 101852 ATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGAT----GCAAAGCAATA-ACGATTTGG 101906 |||| |||||||| |||||||| || | ||||| | ||| ||| || ||| | Sbjct 2414 ATCAGGAAGAAGGCCCAGTGGGCCATGAGATGGATTTCTGATAAGGAATCTAC--TTTCG 2471 Query 101907 CGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCAT 101966 | | | |||| ||||| || || || || |||||||| || ||| | || || | Sbjct 2472 CTCAGCGCCTTGTGGCCTTCGCCGCTGTGGAGGGAATCTTTTTCTCTGGATCTTTTGCTT 2531 Query 101967 CCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCA 102026 |||| |||||| | ||||| | || | ||||||||||||| | |||||| ||| ||| Sbjct 2532 CCATCTTCTGGCTGAAGAAGCGTGGCTTGATGCCTGGTCTCACTTTCTCCAACGAGCTCA 2591 Query 102027 TTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTG 102086 | ||| | ||||| || || || |||||||| ||| | || || | || Sbjct 2592 TCTCTCGTGACGAGGGACTACACACAGACTTTGCTTGCCTTCTCTTTTCTCA---CTTGA 2648 Query 102087 TTGAT-ACCCCATCAAGAGAAAGG--ATTCTTGAAATTGTCACTGAAGCCGTCCGAATTG 102143 || |||| |||| |||| ||| || ||| || ||| || || |||| Sbjct 2649 ACCATCGCCCCGACAAG---AAGGTTATTGAGGATATTATCGTTGAGGCTGTGGCCATTG 2705 Query 102144 AACAAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGA 102203 |||| || || | |||| | || |||||| | |||| ||||||| ||| | | Sbjct 2706 AACAGGAGTTCTTGACAGACGCTCTTCCTGTTGCTCTCCTGGGCATGAACTCTAAGCTAA 2765 Query 102204 TGAGCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGC 102263 || ||||||| ||||| || || || ||| || ||||||| | ||| | ||| Sbjct 2766 TGTGCCAGTATATTGAGTTCGTTGCTGATCGGCTGTTGGTTGCTCTTGGAAACAAGAAGT 2825 Query 102264 ACTATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCG-AGAATAAGACC 102322 ||| || | ||||||||||| |||||||| | ||| || || | || | ||||| Sbjct 2826 ACTTCAACTCTCCCAACCCCTTCGACTTCATGGAAAGTATCTCGCTTGCAGGA-AAGACG 2884 Query 102323 AACTTTTTTGAAAAG 102337 ||||| ||||| ||| Sbjct 2885 AACTTCTTTGAGAAG 2899 >seq586 Length=168373 Score = 116 bits (128), Expect = 7e-21 Identities = 188/268 (70%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 94774 TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTA 94833 |||| || | ||||| || ||||| ||||| ||||| || || |||||| || Sbjct 81560 TGAACGTTAAGGCCGATACCGCCAGCTGTCTTCGAGATCATGGCACAAGTCTTAAGGGTG 81619 Query 94834 TCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGG 94893 || || ||||||||||||||||| || | | | | |||||||| || | ||| ||| Sbjct 81620 TCGTAGATACCCTCAATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGCAAGCTGG 81679 Query 94894 GGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGAC 94953 ||| | || ||| ||| ||||| || || |||||||| || || || | | ||| Sbjct 81680 GGTTGGGGAGTACCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGAGAC 81739 Query 94954 ATGAGATCATATGTTTCAATGACAGATTTGATGTCTGAT-CCGTGAATGCCGACAGCCAC 95012 ||||| | || || |||||| | || || | || | || |||||||| || || || Sbjct 81740 ATGAGGTGGTAGGTCTCAATGGCCTTTTCAATAT-TGTTGCCATGAATGCCAACCGCAAC 81798 Query 95013 ACGCATAATCATGTCCTGAGGGCGCTCA 95040 |||||| | || || ||| || |||||| Sbjct 81799 ACGCATCAACAAGTGCTGCGGACGCTCA 81826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989575492360805