Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20var._20RP-
2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq405 125 1e-23
seq586 116 7e-21
>seq405
Length=35189
Score = 125 bits (138), Expect = 1e-23
Identities = 330/495 (67%), Gaps = 18/495 (4%)
Strand=Plus/Plus
Query 101852 ATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGAT----GCAAAGCAATA-ACGATTTGG 101906
|||| |||||||| |||||||| || | ||||| | ||| ||| || ||| |
Sbjct 2414 ATCAGGAAGAAGGCCCAGTGGGCCATGAGATGGATTTCTGATAAGGAATCTAC--TTTCG 2471
Query 101907 CGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCAT 101966
| | | |||| ||||| || || || || |||||||| || ||| | || || |
Sbjct 2472 CTCAGCGCCTTGTGGCCTTCGCCGCTGTGGAGGGAATCTTTTTCTCTGGATCTTTTGCTT 2531
Query 101967 CCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCA 102026
|||| |||||| | ||||| | || | ||||||||||||| | |||||| ||| |||
Sbjct 2532 CCATCTTCTGGCTGAAGAAGCGTGGCTTGATGCCTGGTCTCACTTTCTCCAACGAGCTCA 2591
Query 102027 TTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTG 102086
| ||| | ||||| || || || |||||||| ||| | || || | ||
Sbjct 2592 TCTCTCGTGACGAGGGACTACACACAGACTTTGCTTGCCTTCTCTTTTCTCA---CTTGA 2648
Query 102087 TTGAT-ACCCCATCAAGAGAAAGG--ATTCTTGAAATTGTCACTGAAGCCGTCCGAATTG 102143
|| |||| |||| |||| ||| || ||| || ||| || || ||||
Sbjct 2649 ACCATCGCCCCGACAAG---AAGGTTATTGAGGATATTATCGTTGAGGCTGTGGCCATTG 2705
Query 102144 AACAAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGA 102203
|||| || || | |||| | || |||||| | |||| ||||||| ||| | |
Sbjct 2706 AACAGGAGTTCTTGACAGACGCTCTTCCTGTTGCTCTCCTGGGCATGAACTCTAAGCTAA 2765
Query 102204 TGAGCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGC 102263
|| ||||||| ||||| || || || ||| || ||||||| | ||| | |||
Sbjct 2766 TGTGCCAGTATATTGAGTTCGTTGCTGATCGGCTGTTGGTTGCTCTTGGAAACAAGAAGT 2825
Query 102264 ACTATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCG-AGAATAAGACC 102322
||| || | ||||||||||| |||||||| | ||| || || | || | |||||
Sbjct 2826 ACTTCAACTCTCCCAACCCCTTCGACTTCATGGAAAGTATCTCGCTTGCAGGA-AAGACG 2884
Query 102323 AACTTTTTTGAAAAG 102337
||||| ||||| |||
Sbjct 2885 AACTTCTTTGAGAAG 2899
>seq586
Length=168373
Score = 116 bits (128), Expect = 7e-21
Identities = 188/268 (70%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 94774 TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTA 94833
|||| || | ||||| || ||||| ||||| ||||| || || |||||| ||
Sbjct 81560 TGAACGTTAAGGCCGATACCGCCAGCTGTCTTCGAGATCATGGCACAAGTCTTAAGGGTG 81619
Query 94834 TCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGG 94893
|| || ||||||||||||||||| || | | | | |||||||| || | ||| |||
Sbjct 81620 TCGTAGATACCCTCAATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGCAAGCTGG 81679
Query 94894 GGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGAC 94953
||| | || ||| ||| ||||| || || |||||||| || || || | | |||
Sbjct 81680 GGTTGGGGAGTACCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGAGAC 81739
Query 94954 ATGAGATCATATGTTTCAATGACAGATTTGATGTCTGAT-CCGTGAATGCCGACAGCCAC 95012
||||| | || || |||||| | || || | || | || |||||||| || || ||
Sbjct 81740 ATGAGGTGGTAGGTCTCAATGGCCTTTTCAATAT-TGTTGCCATGAATGCCAACCGCAAC 81798
Query 95013 ACGCATAATCATGTCCTGAGGGCGCTCA 95040
|||||| | || || ||| || ||||||
Sbjct 81799 ACGCATCAACAAGTGCTGCGGACGCTCA 81826
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989575492360805
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |