Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20var._20RP-
2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq586 221 2e-52
>seq586
Length=168373
Score = 221 bits (244), Expect = 2e-52
Identities = 592/899 (66%), Gaps = 12/899 (1%)
Strand=Plus/Plus
Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248
|| ||||| || || |||||| |||| | ||| ||||| || || | || | |
Sbjct 81215 TCAAACTCATCACCATAAACATCTGCCAAACCAGGGGCTTCATTGGGGCAGAACAGAGTC 81274
Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63308
|| || |||| || ||||| ||||| || |||||||| |||| || || ||
Sbjct 81275 CAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGCGCGTAGAAC 81334
Query 63309 AGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63368
||||| | | ||| |||||| || || ||||| |||||| |||||| | |
Sbjct 81335 AGATCACGGGCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAGGAACTCGAAG 81394
Query 63369 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63428
||||| | |||||| || || | ||| || || | | | ||||| || ||||| ||||||
Sbjct 81395 ATATCGGCATGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAGGGCGCTTGTTACCTCCC 81454
Query 63429 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63488
|| || | || ||||| ||||| || | || | | ||| |||| ||||||||| ||
Sbjct 81455 TGGTCGACATACCTAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAG 81514
Query 63489 ATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCT 63548
||||| || || || ||| || ||||||| || || || ||
Sbjct 81515 GACCCATTAGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGGCCG 81574
Query 63549 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG-TGTCATAGATGCCTTC 63607
|| || || || | || ||||| | || || || |||| | |||| ||||| || ||
Sbjct 81575 ATACCGCCAGCTGTCTTCGAGATCATGGCACAA-GTCTTAAGGGTGTCGTAGATACCCTC 81633
Query 63608 TATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGAC---ATTTGGTGACGAGTAGT 63664
|||||||| || |||| | | || || || |||| | ||| | | | |||
Sbjct 81634 AATGCTATCCTCCTTCATATCGACGAGGAAGCA---AGACGCAAGCTGGGGTTGGGGAGT 81690
Query 63665 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTA 63724
|| ||||| || | ||||||||||| || || || |||| | ||| | || | |||
Sbjct 81691 ACCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGAGACATGAGGTGGTA 81750
Query 63725 CGTCTCAATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAAC 63782
|||||||| || || |||| ||| |||||| || || || |||||||| |||
Sbjct 81751 GGTCTCAATGGCCTTTTCAATATTG--TTGCCATGAATGCCAACCGCAACACGCATCAAC 81808
Query 63783 ATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAA 63842
| |||||| || | ||| ||| ||| || ||| || || |||||| || |
Sbjct 81809 AAGTGCTGCGGACGCTCAGCAACCTTGCCATTGATTCGCAGCAGGTAGGACCGCTCGAGT 81868
Query 63843 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGC 63902
|| || ||||| ||| ||||||| ||||| || || || | |||| | || ||||||
Sbjct 81869 GTCTTGAAACCGAAAAAGTTGTAGTTGAAGTCACGATCATATACAATAGCAGAGTTGAGC 81928
Query 63903 TTATCCTTATATTTGTTAACTATATCCATGGTAATACTTGAAATAATCGGAGAATGTTTC 63962
| ||| || ||| | || || || || | ||||| || || | ||| |
Sbjct 81929 TCATCAGCATGTTTCATGACAATTTCATACGTCTCTTTCGAAATCATTGGCGCGGGTTGC 81988
Query 63963 CCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttttttt 64022
||||| || |||||||||| | | | ||| || || | || | || ||
Sbjct 81989 TTGTTTTTGGGGTTAACATAGTGGTACAGGTCCGAGATGACCAGAGAGAACTGCTTCTTG 82048
Query 64023 GTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64081
|||| |||||| || || || | |||||| | ||| |||| ||||||||||| || ||
Sbjct 82049 GTTTGCTTGTGGAGGTTGGACACGGCTATACGGGCAGCTAAGATGGCATAATCGGGGTG 82107
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629812317404880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |