Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20var._20RP-
2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq405 98.7 9e-16
>seq405
Length=35189
Score = 98.7 bits (108), Expect = 9e-16
Identities = 209/312 (67%), Gaps = 0/312 (0%)
Strand=Plus/Minus
Query 11464 ATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATAAGATCCAC 11523
||| || ||||| || |||||||| |||||| | | ||||| || | ||| | ||
Sbjct 2794 ATCAGCAACGAACTCAATATACTGGCACATTAGCTTAGAGTTCATGCCCAGGAGAGCAAC 2735
Query 11524 CGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATCAATGATTATCGACGT 11583
|||| ||| ||||||| ||||||| ||| || || || |||| ||| || |
Sbjct 2734 AGGAAGAGCGTCTGTCAAGAACTCCTGTTCAATGGCCACAGCCTCAACGATAATATCCTC 2675
Query 11584 TATAACTTCCTTAGATGGTGGATGTAATAAATGTTTAAACATTAAACACGCAAAATCACA 11643
||||| | ||| || |||| || || ||| | | || ||||| ||
Sbjct 2674 AATAACCTTCTTGTCGGGGCGATGGTTCAAGTGAGAAAAGAGAAGGCAAGCAAAGTCTGT 2615
Query 11644 ATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCC 11703
|||| || ||||| | | || || || || || || || | || |||||||| ||
Sbjct 2614 GTGTAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCAGGCATCAAGCC 2555
Query 11704 TCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGC 11763
|| || || | ||| || || | |||||| || ||||| || || ||||||||||||||
Sbjct 2554 ACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCAGAGAAAAAGATTCCCTCCACAGC 2495
Query 11764 TGCAAATGCTAC 11775
|| || || ||
Sbjct 2494 GGCGAAGGCCAC 2483
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468520870248240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |