Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq586 226 4e-54 >seq586 Length=168373 Score = 226 bits (250), Expect = 4e-54 Identities = 593/899 (66%), Gaps = 12/899 (1%) Strand=Plus/Plus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 || ||||| || || ||||||| | || ||||| ||| | || || | || | | Sbjct 81215 TCAAACTCATCACCATAAACATCTGCCAAACCAGGGGCTTCATTGGGGCAGAACAGAGTC 81274 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980 || || || | || ||||| ||||| || |||||||| |||| || || || Sbjct 81275 CAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGCGCGTAGAAC 81334 Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040 ||||| | || ||| ||||| || || ||||| |||||| |||||| | | Sbjct 81335 AGATCACGGGCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAGGAACTCGAAG 81394 Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100 ||||| | |||||| || || | ||| || || | | | || || || ||||| |||||| Sbjct 81395 ATATCGGCATGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAGGGCGCTTGTTACCTCCC 81454 Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160 || || | || ||||| ||||| || | || | | ||| |||| |||||| || || Sbjct 81455 TGGTCGACATACCTAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAG 81514 Query 80161 GTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 80220 | ||||| || || || ||| || ||||||| || || || || Sbjct 81515 GACCCATTAGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGGCCG 81574 Query 80221 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG-TATCATAGATGCCCTC 80279 || || || || | || ||||| | || || || |||| | | || ||||| ||||| Sbjct 81575 ATACCGCCAGCTGTCTTCGAGATCATGGCACAA-GTCTTAAGGGTGTCGTAGATACCCTC 81633 Query 80280 TATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGAC---ATTTGGTGACGACTAGT 80336 |||||||| || |||| | | || || || |||| | ||| | | ||| Sbjct 81634 AATGCTATCCTCCTTCATATCGACGAGGAAGCA---AGACGCAAGCTGGGGTTGGGGAGT 81690 Query 80337 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTA 80396 || ||||| || | ||||||||||| || || || |||| | ||||| || | ||| Sbjct 81691 ACCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGAGACATGAGGTGGTA 81750 Query 80397 CGTCTCAATAGCTGATTCTATATCCCATTG--ATGAATTCCTACCGCGACACGCATTAAC 80454 |||||||| || ||| |||| ||| |||||| || ||||| |||||||| ||| Sbjct 81751 GGTCTCAATGGCCTTTTCAATAT--TGTTGCCATGAATGCCAACCGCAACACGCATCAAC 81808 Query 80455 ATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAA 80514 | |||||| || | ||| | | |||| ||| ||| || || ||| || || | Sbjct 81809 AAGTGCTGCGGACGCTCAGCAACCTTGCCATTGATTCGCAGCAGGTAGGACCGCTCGAGT 81868 Query 80515 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGT 80574 || || ||||| ||| ||||||| ||||| || || || | |||| | |||||||| Sbjct 81869 GTCTTGAAACCGAAAAAGTTGTAGTTGAAGTCACGATCATATACAATAGCAGAGTTGAGC 81928 Query 80575 TTATCCTTATATTTGTTAACTACATCCATGGTGATACTTGAAATAATCGGAGAATGTTTC 80634 | ||| || ||| | || | || || | ||||| || || | ||| | Sbjct 81929 TCATCAGCATGTTTCATGACAATTTCATACGTCTCTTTCGAAATCATTGGCGCGGGTTGC 81988 Query 80635 CCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttttttt 80694 ||||| || |||||||||| | | | ||| || || | || | || || Sbjct 81989 TTGTTTTTGGGGTTAACATAGTGGTACAGGTCCGAGATGACCAGAGAGAACTGCTTCTTG 82048 Query 80695 GTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753 |||| |||||| || || || |||||||| | ||| ||||| ||||||||||| || || Sbjct 82049 GTTTGCTTGTGGAGGTTGGACACGGCTATACGGGCAGCTAAGATGGCATAATCGGGGTG 82107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718262775520440