Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq630 143 6e-29 seq615 93.3 1e-13 >seq630 Length=388802 Score = 143 bits (158), Expect = 6e-29 Identities = 161/213 (76%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | ||| ||||| || || ||||| || ||||| | || | || ||| Sbjct 62555 AGGACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAATCAGACAAGGTACGGCCATCT 62496 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || ||||| ||||||||||| || || | ||||||||||||||| || || || |||||| Sbjct 62495 TCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCAGGAGGGATACCCTCCTTATCC 62436 Query 104468 TGAATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 || ||| ||||| || ||||| || | ||| || || ||||| |||| ||| ||||| Sbjct 62435 TGGATC-TTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCTACTTCTAATGTGATAGT 62377 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || || || || || || || || ||||| Sbjct 62376 CTTTCCCGTGAGAGTCTTAACGAAGATTTGCAT 62344 Score = 122 bits (134), Expect = 2e-22 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 |||||||| ||||| || ||||| || || ||||| | || || || || || || ||| Sbjct 62004 GTAGATTCCTTCTGGATGTTATAATCGGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCA 61945 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||| | | ||| || |||||||| || || || |||||||||||||| | || Sbjct 61944 GCGAAAATCAAGCGCTGCTGGTCAGGAGGGATACCCTCCTTATCCTGAATCTTCGACTTG 61885 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | || ||||| | || ||||| | || || ||||| || || || || Sbjct 61884 ACATTGTCAATAGTGTCGCTGGACTCGACCTCCAAGGTGATGGTCTTGCCCGTGAGAGTC 61825 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 61824 TTGACGAAAATCTGCAT 61808 >seq615 Length=220600 Score = 93.3 bits (102), Expect = 1e-13 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 104372 TTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATT 104431 |||||||| || ||||| || || | || || || || || || ||||| || || Sbjct 21219 TTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 21160 Query 104432 AGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCT 104491 || | ||| || ||||| || || || || || ||||| ||||| || || || || || Sbjct 21159 AGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 21100 Query 104492 ACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550 | ||| ||||| | || || || || |||||||||||||| || || || || || || Sbjct 21099 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATAGTCTTACCCGTCAGGGTCTTGACGAA 21041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151388501212068