Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq586 251 2e-61 >seq586 Length=168373 Score = 251 bits (278), Expect = 2e-61 Identities = 476/691 (69%), Gaps = 16/691 (2%) Strand=Plus/Minus Query 363389 TTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTG 363448 ||||||| | ||||| | ||| |||||||| || |||||||| | ||| || Sbjct 81884 TTTTCGGTTTCAAGACACTCGAGCGGTCCTACCTGCTGCGAATCAATGGCAAGGTTGCTG 81825 Query 363449 AACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATG 363508 | || |||||||| |||| ||||||||||| |||| || ||| || || |||| Sbjct 81824 AGCGTCCGCAGCACTTGTTGATGCGTGTTGCGGTTGGCATTCATGGCAACAATATTGAAA 81765 Query 363509 CCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTAT---TCACGCACGCCACGCCAA 363565 || ||||| || || | || | || ||| || |||| || || | || | Sbjct 81764 AGGCCATTGAGACCTACCACCTCAT--GT-CTCAGAAATACTTCACTCATGCTTCTCCTA 81708 Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGA 363625 | ||| ||||||||| |||| | || ||| | | |||||||| || | | |||| Sbjct 81707 CTCTGTTCAATGCTGGTACTCCCCAACCCCAGCTTGCGTCTTGCTTCCTCGTCGATATGA 81648 Query 363626 AGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGA 363685 |||| ||| ||| |||||||||| ||||| ||||||| |||||| | || || |||| Sbjct 81647 AGGAGGATAGCATTGAGGGTATCTACGACACCCTTAAGACTTGTGCCATGATCTCGAAGA 81588 Query 363686 ATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCG 363743 || ||||| || || | | || || || | ||||| |||| | |||||| | Sbjct 81587 CAGCTGGCGGTATCGGCCTTAACGTTC-ACCGCATCCGTGCCACAGG-CTCCTACATTGG 81530 Query 363744 CGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803 ||||| || | ||| || || | |||||||||||||| ||||| |||| ||||| Sbjct 81529 TGGCACTAATGGGTCCTCTAACGGTATTGTTCCCATGCTTCGCGTGTTCAACAACACTGC 81470 Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863 ||||| ||||||||||| || |||||| || || |||||||| || |||||||| Sbjct 81469 TAGGTATGTCGACCAGGGAGGTAACAAGCGCCCTGGCGCTTTTGCTATTTACCTCGAGCC 81410 Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATT 363923 | ||||||||||| || ||||| || || || || || ||| || || |||||| | Sbjct 81409 TTGGCATGCCGATATCTTCGAGTTCCTGGATCTTCGCAAGAACCACGGTAAGGAGGAAGT 81350 Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983 | || |||||||||||||| || || ||| |||| | || |||||||| || || Sbjct 81349 CAGAGCCCGTGATCTGTTCTACGCGCTGTGGACCCCTGATCTGTTCATGAAGCGAGTTGA 81290 Query 363984 GGC---AGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGT 364040 | | ||| | ||| | || || ||||| | ||| || ||| | | ||||| Sbjct 81289 GTCCAACGGT---GACTGGACTCTGTTCTGCCCCAATGAAGCCCCTGGTTTGGCAGATGT 81233 Query 364041 ATGGGGTGACGACTATGTTGCTCTATACGAA 364071 | ||||| || | || |||||| || ||| Sbjct 81232 TTATGGTGATGAGTTTGATGCTCTTTATGAA 81202 Score = 141 bits (156), Expect = 2e-28 Identities = 617/972 (63%), Gaps = 12/972 (1%) Strand=Plus/Minus Query 364095 TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGAC 364154 ||||||||| || || || ||||| |||| ||| || | || | |||| ||||| Sbjct 81124 TCGTAAGACCATCAAGGCTCAAAAGCTTTGGTATGCTATTCTTGAGGCTCAGACCGAGAC 81065 Query 364155 AGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCT 364214 || | |||| |||| | ||||| ||| | |||||| ||| ||||||| || |||| Sbjct 81064 TGGCAACCCCTTTATGCTTTACAAGGATGCCTGCAACAAGAAGAGCAACCAGAAGAACCT 81005 Query 364215 TGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACG 364273 || || |||| |||| | || || || || ||||| ||||| |||| ||||| |||| Sbjct 81004 GGGAACTATTC-GCAGCTCCAATCTTTGCACGGAGATCATTGAGTACAGTGCTCCTGACG 80946 Query 364274 AGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGA------TG 364327 | ||| || || ||||| || || |||||||||| | ||||| | | || Sbjct 80945 AAGTTGCTGTCTGCAACCTGGCTTCTCTCGCGCTTCCTACTTTTGTCGACGCGGCCCGTG 80886 Query 364328 GTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGCTACTTGCAATCTCGA 364385 | | |||| | | || | || || | || || | | | || | | Sbjct 80885 GAGAGTATGACTTCGGCAAGCTGCACGAGGTTGTGCAGGTCTTGGTTCGT--AACTTGAA 80828 Query 364386 CAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCA 364445 |||| |||| || || || || || |||| || ||| || || ||||| || Sbjct 80827 CAAGATTATTGATGTAAACTACTACCCTGTTCCAGAGGCCAAGAAGAGCAACATGCGGCA 80768 Query 364446 TCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGC 364505 ||||| |||| ||||||||| | || | || || | || | || || | Sbjct 80767 CCGCCCCATTGCTCTTGGTGTCAATGGTTTGGCCGATGCCTTCCTTGCCCTGCGCCTGCC 80708 Query 364506 ATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGC 364565 || || || | || || | ||||| | |||||||||| || || ||| | Sbjct 80707 GTTCGACTCCGCCGAAGCAAGACAGCTAAACATCCAGATCTTTGAGACCATCTATCACGG 80648 Query 364566 CGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGG 364625 || ||||||| || ||||| |||| || || || || || ||||| Sbjct 80647 TGCTTTGACTGCATCTTGTGAGCTGGCCAAGGAGTTTGGTCCTTATGAAACCTACGAGGG 80588 Query 364626 GTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCG 364685 ||||| | || ||||| | |||||| |||| | ||| | || || | | || Sbjct 80587 CTCCCCCGTCTCTCAGGGTATTCTCCAGTATGATATGTGGGACAGAACCCCCACGGACCT 80528 Query 364686 ATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGT 364745 ||| |||||||| | || | || || |||| ||| ||| ||| | | Sbjct 80527 CTGGGACTGGGATTCTCTGAAGGCGAAGATTGCCCAGCACGGTGTTCGTAACAGTTTGTT 80468 Query 364746 TACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGA 364805 || || |||||||| || || ||||| || || |||||| || || || Sbjct 80467 GGTGGCACCGATGCCCACCGCAAGCACCAGCCAGATTCTGGGCTTCAACGAATGTTTTGA 80408 Query 364806 ACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAA 364865 || | || || | || || ||||| |||||| | || || || | ||| ||||| Sbjct 80407 GCCTTACACCTCGAACATCTACTCTCGCCGTGTTCTTGCTGGTGAGTTCCAGGTCGTTAA 80348 Query 364866 TAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTA 364925 | || ||||||||||| ||||| || |||||| |||| |||||| ||| Sbjct 80347 CCCTTGGCTTCTCAAGGATCTTGTCGACCTTGGTCTGTGGTCGGACAACATGAAAAACCG 80288 Query 364926 TATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCC 364985 ||||||||| | | ||| || || || |||||||| |||| | || | ||| | Sbjct 80287 TATCATCGCAGATGGTGGCTCCGTTCAAAACATTCCCAACATTCCCGCCGACATCAAGGC 80228 Query 364986 TATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCG 365045 | | ||||| ||||| |||||||| ||| || || || | | ||||| ||||| || Sbjct 80227 TCTCTACAAGACCGTGTGGGAAATCTCCCAACGTACCATCCTGCAGATGGCCGCCGACCG 80168 Query 365046 CGGTGCTTTTAT 365057 |||||||| || Sbjct 80167 TGGTGCTTTCAT 80156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303342394824722