Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq630 132 5e-26 seq405 127 2e-24 seq615 116 3e-21 seq606 113 4e-20 seq586 109 5e-19 >seq630 Length=388802 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||||||||| | || | || |||||||||||| ||||||||| Sbjct 62798 CCACCACGCAGACGCAGCACCAGGTGGAGCGTGCTCTCCTTTTGAATATTGTAATCGGAG 62739 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| | | || || | |||||| || ||| |||| | |||||||||||| |||||| Sbjct 62738 AGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGG 62679 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | || | || |||| |||||| | Sbjct 62678 ATGCCCTCCTTGTCTTGGATCTTGCTCTTCACGTTGTCAATCGTGTCGGAGGACTCCACC 62619 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||||| ||| || ||||| ||||| || ||||| ||||||||| Sbjct 62618 TCCAGGGTAATGGTCTTTCCGGTGAGAGTCTTGACGAAGATCTGCATG 62571 Score = 129 bits (142), Expect = 6e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || | || | || || ||||| || ||||| |||||| Sbjct 62035 GCCACCACGAAGACGGAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAATCGGA 61976 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| ||||| ||||||||||| ||| | || || ||||||||||| ||||| Sbjct 61975 AAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAGGAGG 61916 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || || || || ||| ||||| | || | ||| ||| ||||||||| Sbjct 61915 GATACCCTCCTTATCCTGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGAC 61856 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | ||| || || || ||||| || ||||||||||||||| Sbjct 61855 CTCCAAGGTGATGGTCTTGCCCGTGAGAGTCTTGACGAAAATCTGCATG 61807 Score = 113 bits (124), Expect = 4e-20 Identities = 155/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | ||||| ||||| |||||||| || ||| | Sbjct 62342 CCACCACGAAGACGAAGGACGAGGTGGAGAGTCGATTCCTTCTGAATGTTATAGTCGGAC 62283 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| | ||||||||| ||| | || | |||||||||||| |||||| Sbjct 62282 AAGGTGCGGCCATCCTCCAACTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCAGGAGGG 62223 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||| | | || | |||||| |||| || | Sbjct 62222 ATACCCTCCTTGTCCTGGATCTTCGACTTAACGTTATCAATGGTATCGCTGGATTCCACC 62163 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 |||| |||| ||| || || || || || || |||| Sbjct 62162 TCGAGAGTAATGGTCTTGCCAGTGAGGGTCTTGACGA 62126 >seq405 Length=35189 Score = 127 bits (140), Expect = 2e-24 Identities = 305/458 (67%), Gaps = 15/458 (3%) Strand=Plus/Plus Query 46144 ACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGT 46203 |||||||| |||| | |||||||| || ||||||||| ||||||| ||||| | Sbjct 2465 ACTTTCGCTCAGCGCCTTGTGGCCTTCGCCGCTGTGGAGGGAATCTTTTTCTCTGGATCT 2524 Query 46204 TTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAAC 46263 ||||| ||||||| | | || | ||| | ||||| || || || || |||| Sbjct 2525 TTTGCTTCCATCTTCTGGCTGAAGAAGCGTGGCTTGATGCCTGGTCTCACTTTCTCCAAC 2584 Query 46264 GAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACT 46323 ||||| || || || |||||||| || || || |||||||| || || || | || Sbjct 2585 GAGCTCATCTCTCGTGACGAGGGACTACACACAGACTTTGCTTGCCTTCTCTTTT---CT 2641 Query 46324 CGCGTGCACGACAAGCTTGCGCCCGACACCGTGCT----GAGCATGTTCAAG--GAGGCG 46377 | | || || | | || ||||||| | | ||| || || | ||||| Sbjct 2642 CACTTGAACCA-----TCGC-CCCGACAAGAAGGTTATTGAGGATATTATCGTTGAGGCT 2695 Query 46378 GTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAAC 46437 ||||||||||| ||||||| || || | ||| || || | ||| || |||||||||||| Sbjct 2696 GTGGCCATTGAACAGGAGTTCTTGACAGACGCTCTTCCTGTTGCTCTCCTGGGCATGAAC 2755 Query 46438 GCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCAC 46497 | || ||||||| | || || ||||| || || || || ||| | || ||| Sbjct 2756 TCTAAGCTAATGTGCCAGTATATTGAGTTCGTTGCTGATCGGCTGTTGGTTGCTCTTGGA 2815 Query 46498 CAGCCGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAG 46557 | |||| | || || | | ||| || || || || ||| | | ||||| || | Sbjct 2816 AACAAGAAGTACTTCAACTCTCCCAACCCCTTCGACTTCATGGAAAGTATCTCGCTTGCA 2875 Query 46558 GGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 || || || || || || || ||||| || || || || Sbjct 2876 GGAAAGACGAACTTCTTTGAGAAGCGTGTTGGTGACTA 2913 >seq615 Length=220600 Score = 116 bits (128), Expect = 3e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| ||||||||||| ||||||| |||||| ||||| |||||||| || ||| ||| Sbjct 21221 CCTTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 21162 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | ||||||||||| || ||||| || || ||||| ||| || ||||| | | Sbjct 21161 TCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGT 21102 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || ||| | ||||| | ||||| ||||| || ||||| || || || || |||| Sbjct 21101 CGATGGTGTCGCTCGACTCAACGTCGAGGGTAATAGTCTTACCCGTCAGGGTCTTGACGA 21042 Query 131225 AA 131226 || Sbjct 21041 AA 21040 >seq606 Length=198141 Score = 113 bits (124), Expect = 4e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| ||||| | || | |||||||||||| || |||||||| || Sbjct 90785 CCACCACGCAGACGGAGCACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAG 90844 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || |||||| ||||||||||| ||| |||| | |||||||||||| || ||| Sbjct 90845 AGGGTACGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCGGGGGGG 90904 Query 131128 ATTCCTTCTTTGTCGGT 131144 ||||| || ||||| || Sbjct 90905 ATTCCCTCCTTGTCTGT 90921 >seq586 Length=168373 Score = 109 bits (120), Expect = 5e-19 Identities = 464/725 (64%), Gaps = 6/725 (1%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 || |||||||| ||||| || || | ||||| || | || | ||| || ||| | || Sbjct 80348 TTAACGACCTGGAACTCACCAGCAAGAACACGGCGAGAGTAGATGTTCGAGGTGTAAGGC 80407 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 |||||| | ||||| |||||| || || ||| ||||||||||||| |||||| Sbjct 80408 TCAAAACATTCGTTGAAGCCCAGAATCTGGCTGGTGCTTGCGGTGGGCATCGGTGCCACC 80467 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 || || || || | ||||||| || | |||| || | | |||| ||||| Sbjct 80468 AACAAACTGTTACGAACACCGTGCTGGGCAATCTTCGCCTTCAGAGAATCCCAGTCCCAG 80527 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || || || | ||||||||| || ||||| | ||| |||| | ||||| | Sbjct 80528 AGGTCCGTGGGGGTTCTGTCCCACATATCATACTGGAGAATACCCTGAGAGACGGGGGAG 80587 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGT-TTTGGCGAGCTCGCAACTCGCCTCCAGAGC 145356 || | ||| ||| | || || | ||||| ||||| ||| || || ||| Sbjct 80588 CCCTCGTAGGTTTCATAA-GGACCAAACTCCTTGGCCAGCTCACAAGATGCAGTCAAAGC 80646 Query 145357 GCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTA 145416 ||| ||| || ||||| || || |||| ||| | | ||||| || ||| | Sbjct 80647 ACCGTGATAGATGGTCTCAAAGATCTGGATGTTTAGCTGTCTTGCTTCGGCGGAGTCGAA 80706 Query 145417 CGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCCG 145476 ||||| |||||| | || |||||||| | || | | || | | ||||| || Sbjct 80707 CGGCAGGCGCAGGGCAAGGAAGGCATCGGCCAAACCATTGACACCAAGAGCAATGGGGCG 80766 Query 145477 ATGTTTCATGTTGCTCATCCTCGCCGACTCG-ATAGGATA-TCGATTACGGTCGATAATT 145534 || |||||||||| || | ||| || | | ||| || | | |||| || ||||| Sbjct 80767 GTGCCGCATGTTGCTCTTCTTGGCC-TCTGGAACAGGGTAGTAGTTTAC-ATCAATAATC 80824 Query 145535 TTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGA 145594 || |||||||| || || | |||| || | ||| ||| | |||||| || Sbjct 80825 TTGTTCAAGTTACGAACCAAGACCTGCACAACCTCGTGCAGCTTGCCGAAGTCATACTCT 80884 Query 145595 GCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGTC 145654 | | | || | ||| | || | |||| || |||| || || || || Sbjct 80885 CCACGGGCCGCGTCGACAAAAGTAGGAAGCGCGAGAGAAGCCAGGTTGCAGACAGCAACT 80944 Query 145655 TCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCC 145714 || || | | ||||| | | |||||| | ||| | |||| | || |||||| Sbjct 80945 TCGTCAGGAGCACTGTACTCAATGATCTCCGTGCAAAGATTGGAGCTGCGAATAGTTCCC 81004 Query 145715 AGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCA 145774 || || | ||| || || ||| ||||||| || |||||||| ||||| | || |||| Sbjct 81005 AGGTTCTTCTGGTTGCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATAAAGGGGTTGCCA 81064 Query 145775 GTCTC 145779 ||||| Sbjct 81065 GTCTC 81069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472008840992640