Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq405 122 2e-22 seq632 95.1 2e-14 >seq405 Length=35189 Score = 122 bits (134), Expect = 2e-22 Identities = 297/440 (68%), Gaps = 24/440 (5%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 || ||||| || | ||| || | || ||||| |||||||||||||||||||| | Sbjct 2895 TCAAAGAAGTTCGTCTTTCCTGCAAGCGAGATACTTTCCATGAAGTCGAAGGGGTTGGGA 2836 Query 251623 GCATTG---TACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCC 251679 | ||| |||| |||| | ||||| || || || | || || || || ||||| Sbjct 2835 GAGTTGAAGTACTTCTTG---TTTCCAAGAGCAACCAACAGCCGATCAGCAACGAACTCA 2779 Query 251680 AGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAG 251739 | |||||| | ||| || | |||||||||||| | | | | ||||| || || Sbjct 2778 ATATACTGGCACATTAGCTTAGAGTTCATGCCCAGGAGAGCAACAGGAAGAGCGTCTGTC 2719 Query 251740 ATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTG--TGCCA 251794 | ||| |||| ||| |||| || ||||| | | ||| ||| | |||| || | Sbjct 2718 AAGAACTCCTGTTCAATGGCCACAGCCTCAACGATAATATCCTCAATAACCTTCTTGTCG 2659 Query 251795 GAGACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGC---CAAACTGTTGGTGCAGAC 251851 | | | || | || || |||| | || || || |||| | | ||| || | Sbjct 2658 GGGCGA---TGGT-TCAAG---TGAGAAAAG-AGAAGGCAAGCAAAGTCTGTGTGTAGTC 2607 Query 251852 CCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCC 251911 ||||||| ||| ||||| ||||||||| | | || |||||||||| ||||| ||| Sbjct 2606 CCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCAGGCATCAAGCCACGCTTCT 2547 Query 251912 TGAGCCAGAAGATTGC-GCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCAT 251970 | ||||||||||| | ||||||| |||||||||| | | ||||| ||| | | Sbjct 2546 TCAGCCAGAAGATGGAAGCAAAAG-ATCCAGAGAAAAAGATTCCCTCCACAGCGGCGAAG 2488 Query 251971 GCAACAAGGCGCTCAGCAAA 251990 || |||||||||| ||| || Sbjct 2487 GCCACAAGGCGCTGAGCGAA 2468 >seq632 Length=465644 Score = 95.1 bits (104), Expect = 2e-14 Identities = 171/244 (70%), Gaps = 12/244 (5%) Strand=Plus/Minus Query 280649 CAAGAATGTTGAGGACCA-TATGACCAAGCTGGGTCTGGACCCCGA----GTTTACAACT 280703 |||| | |||||| ||| | || |||| | ||||| || |||| |||| || Sbjct 307312 CAAGGAGATTGAGGCCCACTGTG-CCAACTTCGGTCTCGATGCCGAACTCGTTT----CT 307258 Query 280704 CACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GC 280762 ||||| || || |||||||| || || || ||| ||||| | ||| ||| || || Sbjct 307257 CACTCCCGTATGCGCGGTCTGTCCGGTGGTCAGCGTGTCAAGGTCGTCCTCGCCGCCTGC 307198 Query 280763 TCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822 || |||||| | |||||||| ||||| ||||||||||| ||||||||||| ||||| || Sbjct 307197 TC-GTGGCAGCGTCCTCACGTCATCGTCCTCGACGAGCCCACCAACTATCTCGACCGTGA 307139 Query 280823 GAGCCTGGGCGCTCTGAGTGCTGCTCTGGACACATTTGGCGGCGGCGTCGTAGTCATTTC 280882 ||||| || ||| ||||| | || || | || || ||||| ||||| | Sbjct 307138 CTCTCTGGGTGCCCTGTCCAAGGCTCTCAAGACTTTCGAGGGTGGTGTCGTTATCATTAC 307079 Query 280883 TCAC 280886 ||| Sbjct 307078 CCAC 307075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027827963494311