Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq630 190 4e-43 seq615 114 2e-20 seq632 93.3 8e-14 >seq630 Length=388802 Score = 190 bits (210), Expect = 4e-43 Identities = 179/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293 ||| || || || |||| |||| ||| |||||| ||| ||||| || || |||||||| Sbjct 62799 TCCACCACGCAGACGCAGCACCAGGTGGAGCGTGCTCTCCTTTTGAATATTGTAATCGGA 62740 Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353 ||| |||||||||||||| |||||||| || ||||| ||||| | || ||||| || || Sbjct 62739 GAGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGG 62680 Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413 ||||| ||||||||||| ||||| ||| ||| || || ||||| | || || || Sbjct 62679 GATGCCCTCCTTGTCTTGGATCTTGCTCTTCACGTTGTCAATCGTGTCGGAGGACTCCAC 62620 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| ||| ||||| ||||| ||||| ||||||||||| |||||||| Sbjct 62619 CTCCAGGGTAATGGTCTTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 62572 Score = 161 bits (178), Expect = 2e-34 Identities = 174/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | |||| ||| || || || || || ||||||||||||||||| Sbjct 62034 CCACCACGAAGACGGAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAATCGGAA 61975 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || | | || ||||| || || Sbjct 61974 AGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAGGAGGG 61915 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG-ATTCTAC 68413 || || ||||| || |||||||| | |||||| || || ||||| |||| | || || Sbjct 61914 ATACCCTCCTTATCCTGAATCTTCGACTTGACATTGTCAATAGTGTC-GCTGGACTCGAC 61856 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||||||||||| || |||||||| ||||||||||| |||||||| Sbjct 61855 CTCCAAGGTGATGGTCTTGCCCGTGAGAGTCTTGACGAAAATCTGCAT 61808 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||| || || ||||| || |||||||| || ||||| || Sbjct 62570 CCACCACGCAGACGGAGGACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAATCAGAC 62511 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| | ||||| || || || ||||| | ||||| || || || Sbjct 62510 AAGGTACGGCCATCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCAGGAGGG 62451 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| || || ||||| |||||| ||||||||||||| || |||||| Sbjct 62450 ATACCCTCCTTATCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCTACT 62391 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || ||||| || ||||||||||| ||||| ||||| || ||||| Sbjct 62390 TCTAATGTGATAGTCTTTCCCGTGAGAGTCTTAACGAAGATTTGCAT 62344 Score = 125 bits (138), Expect = 1e-23 Identities = 160/218 (73%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | || | ||| || || || || || || |||||||| ||||| Sbjct 62342 CCACCACGAAGACGAAGGACGAGGTGGAGAGTCGATTCCTTCTGAATGTTATAGTCGGAC 62283 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | ||||| || |||||||| || ||||| || || | || ||||| || || Sbjct 62282 AAGGTGCGGCCATCCTCCAACTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCAGGAGGG 62223 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG-ATTCTAC 68413 || || |||||||| || ||||| | ||| ||| || ||||| || |||| |||| || Sbjct 62222 ATACCCTCCTTGTCCTGGATCTTCGACTTAACGTTATCAATGGTATC-GCTGGATTCCAC 62164 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 || | || ||||| || || |||||||||||||||| Sbjct 62163 CTCGAGAGTAATGGTCTTGCCAGTGAGGGTCTTGACGA 62126 >seq615 Length=220600 Score = 114 bits (126), Expect = 2e-20 Identities = 135/180 (75%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || || ||||| || ||| || || | ||||| || | |||||| || ||||| || Sbjct 21219 TTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 21160 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| || || || || |||||||| || ||||| ||||||||| ||| Sbjct 21159 AGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 21100 Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| ||| || || || || | ||| || || || ||||| |||||||||||||| Sbjct 21099 ATGGTGTC-GCTCGACTCAACGTCGAGGGTAATAGTCTTACCCGTCAGGGTCTTGACGAA 21041 >seq632 Length=465644 Score = 93.3 bits (102), Expect = 8e-14 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 225818 GGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCCG 225877 ||||| || || ||||| | || || ||||| | ||| ||| |||| || | ||| Sbjct 308489 GGGAAACCTTCAAGCTGCTCGTTGTTGATGGCACGCATCAGAGTAGTCTTACCGGTACCG 308548 Query 225878 TTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAGG 225937 || || |||| || |||||| | | || ||||| | | |||| || |||||| Sbjct 308549 TTAGGTCCGAGAAGACCGTAACGCTGACCACGCTTCAGGCGGAGGGAGGTCTGGTTCAGC 308608 Query 225938 AGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996 ||||||||| ||||||| ||||| ||||| ||| | ||| || || ||||||||||| Sbjct 308609 AGGATCTTGGCACCATACGCAAGAGAGAAGGTGCAGTTGCAGAGATCTTCACCCTCCTC 308667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921614669892120