Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20var._20RP-
2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq586 136 7e-27
seq405 125 1e-23
>seq586
Length=168373
Score = 136 bits (150), Expect = 7e-27
Identities = 324/479 (68%), Gaps = 18/479 (4%)
Strand=Plus/Plus
Query 244970 GGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATC 245029
||||| | ||| |||| || ||| | || || | || |||||| || || ||| ||
Sbjct 81260 GGGCAGAACAGAGTCCAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTC 81319
Query 245030 CAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGC--TCGTCCGAGCCAGTGTTCTTCCTCA 245087
|| || || | ||| || || | || ||||| || ||| || |||||| | |
Sbjct 81320 CACAGCGCGTAGAACAGATCACGGG--CTCTGACTTCCTCCTTACCGTGGTTCTTGCGAA 81377
Query 245088 GCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGG 245147
| |||| || || |||| ||| | ||||| ||||| | ||| | ||| | ||||| |
Sbjct 81378 GATCCAGGAACTCGAAGATATCGGCATGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAG 81437
Query 245148 GCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTA 245206
| |||||||| ||||||||||| || ||| | || | |||||| | ||| || |
Sbjct 81438 GGCGCTTGTTACCTCCCTGGTCGACATACCTAGC-AGTGTTGTTGAACACGCGAAGCATG 81496
Query 245207 GGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGG 245266
|| || || ||||||||| || || ||||| ||||||| ||| || | | ||
Sbjct 81497 GGAACAATACCGTTAGAGGACCCATTAGTGCCACCAATGTAGGAGCCTGTGGCAC---GG 81553
Query 245267 TTGCTGATGGAC----ATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTT 245322
||| | || || | ||| | ||||| || ||| ||||| | ||| || ||||
Sbjct 81554 ATGC-GGTGAACGTTAAGGCCGATACCGCCAGCTGTCTTCGAGATCATGGCACAAGTCTT 81612
Query 245323 GATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGA 245382
| |||||| || ||||| ||||| ||| |||||| | || || ||||| || |
Sbjct 81613 AAGGGTGTCGTAGATACCCTCAATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGC 81672
Query 245383 CAGCTGGGGCTTGGGGCTGCACGAG--TTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439
|||||||| |||||| | || || ||||||||||| || || || || |||||
Sbjct 81673 AAGCTGGGG-TTGGGG-AGTACCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTA 81729
>seq405
Length=35189
Score = 125 bits (138), Expect = 1e-23
Identities = 295/442 (67%), Gaps = 5/442 (1%)
Strand=Plus/Plus
Query 42705 CTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTC 42764
|| || ||||| |||| || ||||| ||||| ||||| || | || || |||||||||
Sbjct 2480 CTTGTGGCCTTCGCCGCTGTGGAGGGAATCTTTTTCTCTGGATCTTTTGCTTCCATCTTC 2539
Query 42765 TGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824
||||| ||| || | | |||||| || ||||| ||||| ||||| |||||| |
Sbjct 2540 TGGCTGAAGAAGCGTGGCTTGATGCCTGGTCTCACTTTCTCCAACGAGCTCATCTCTCGT 2599
Query 42825 GACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAG 42884
|||||||| || || | |||||||| ||||| || || || ||| | | ||
Sbjct 2600 GACGAGGGACTACACACAGACTTTGCTTGCCTTCTCTTTTC---TCACTTGAACCATCGC 2656
Query 42885 CCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTC 42944
||| ||| || | || || ||| ||||| |||| || || ||||||||
Sbjct 2657 CCCGACAAGAAGGTTATTGAGGATATTATCGTTGAGGCTGTGGCCATTGAACAGGAGTTC 2716
Query 42945 CTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTAC 43004
| || | | || || || | || | ||||||||| | || |||||| ||||
Sbjct 2717 TTGACAGACGCTCTTCCTGTTGCTCTCCTGGGCATGAACTCTAAGCTAATGTGCCAGTAT 2776
Query 43005 ATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACAC 43063
|| ||| ||| || || | || | || | ||| || | || |||| |
Sbjct 2777 ATTGAGTTCGTTGCTGATCGGCTGTTGGTTGCTCTTGGAAACAAGAAG-TACTTCAACTC 2835
Query 43064 GCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGA 43123
|| |||||||||||| ||||| | |||||| | | || ||||| ||||| || ||
Sbjct 2836 TCCCAACCCCTTCGACTTCATGGAAAGTATCTCGCTTGCAGGAAAGACGAACTTCTTTGA 2895
Query 43124 GAAGCGCGTCGCCGACTACCAG 43145
|||||| || | |||||||||
Sbjct 2896 GAAGCGTGTTGGTGACTACCAG 2917
Score = 113 bits (124), Expect = 9e-20
Identities = 202/289 (70%), Gaps = 7/289 (2%)
Strand=Plus/Plus
Query 42309 ATGTACAAGAAGGC-GCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGA 42367
||||||||||| || | || | ||| ||||||||||||||||||||| || |||| ||
Sbjct 2029 ATGTACAAGAAAGCCGAAGCT-TCCTTCTGGACCGCCGAGGAGATTGATCTCTCCAAAGA 2087
Query 42368 CACGGCCGGCTGGGAGTCACTGTCTGAGA-ACGAAAAG---TTTTTCCTCAAAAACATAC 42423
| || |||| | || |||||| |||| || | |||| || | | |
Sbjct 2088 TCTGCACGACTGGAACA-ACCGTCTGAATGACGATGAGCGTTATTTCATCTCTCATGTCC 2146
Query 42424 TGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGA 42483
| ||||||||||| ||||||||||| || || ||||||||| || | |||| |
Sbjct 2147 TTGCCTTCTTCGCTGCCTCTGACGGAATCGTTAATGAGAACTTGTTGGAGCGCTTCAGCA 2206
Query 42484 AAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACG 42543
| ||||||||| |||||| || |||||||||||||||||||| || ||||||
Sbjct 2207 ATGAGGTGCAGGTGCCTGAGGCTCGATGCTTCTACGGCTTCCAGATTATGATTGAGAACA 2266
Query 42544 TGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCC 42592
| || || ||| ||| || ||| | | || |||||| ||| ||
Sbjct 2267 TTCATTCGGAGACATACTCCCTGCTGATTGATACATACATCAAGGAGCC 2315
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944331279354960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |