Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20var._20RP-
2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq630 136 9e-27
seq615 111 4e-19
seq559 89.7 1e-12
>seq630
Length=388802
Score = 136 bits (150), Expect = 9e-27
Identities = 169/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| || || | || || || || | |||||| || ||||| ||||| || ||||
Sbjct 62799 TCCACCACGCAGACGCAGCACCAGGTGGAGCGTGCTCTCCTTTTGAATATTGTAATCGGA 62740
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
||| || | || ||||| || || || || |||||||| |||||||| || | ||
Sbjct 62739 GAGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGG 62680
Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTA 288424
||| || || || || ||||| || ||| |||||||| || || | ||| || || |
Sbjct 62679 GATGCCCTCCTTGTCTTGGATCTT-GCTCTTCACGTTGTCAATCGTGTCGGAGGACTCCA 62621
Query 288425 CTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
| || || || || ||||| ||||| |||||||||||||| ||||||||
Sbjct 62620 CCTCCAGGGTAATGGTCTTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 62572
Score = 131 bits (144), Expect = 4e-25
Identities = 159/217 (73%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | ||| ||||| || | || ||| || || || ||||||||||
Sbjct 62342 CCACCACGAAGACGAAGGACGAGGTGGAGAGTCGATTCCTTCTGAATGTTATAGTCGGAC 62283
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| ||||| || || || || || || || ||||| ||||||||||| || | |||
Sbjct 62282 AAGGTGCGGCCATCCTCCAACTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCAGGAGGG 62223
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || |||||||| |||| || ||||| || || | |||||| ||||| ||
Sbjct 62222 ATACCCTCCTTGTCCTGGATCTTCGACTTAACGTTATCAATGGTATCGCTGGATTCCACC 62163
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463
||||| || || ||||| || || || ||||||||||
Sbjct 62162 TCGAGAGTAATGGTCTTGCCAGTGAGGGTCTTGACGA 62126
Score = 125 bits (138), Expect = 2e-23
Identities = 170/233 (73%), Gaps = 3/233 (1%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| || || | || || ||||| | ||| ||| ||||||||||| || |
Sbjct 62574 CATG-CCACCACGCAGACGGAGGACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAAT 62516
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
| | | || || || ||||| | ||| ||||| || ||||| |||||||||||| |
Sbjct 62515 CAGACAAGGTACGGCCATCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCAG 62456
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGAT 288420
||||| || || ||||||||||| || ||| || || || || || | || ||
Sbjct 62455 GAGGGATACCCTCCTTATCCTGGATCTT-GCTCTTGACATTGTCGATGGTGTCTGAAGAC 62397
Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|||||||| | ||||| ||||| || || |||||||| ||||| || |||||
Sbjct 62396 TCTACTTCTAATGTGATAGTCTTTCCCGTGAGAGTCTTAACGAAGATTTGCAT 62344
Score = 118 bits (130), Expect = 3e-21
Identities = 166/232 (72%), Gaps = 1/232 (0%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| || || | || || || || | || ||| || ||||| ||||| |
Sbjct 62038 CATG-CCACCACGAAGACGGAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAAT 61980
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
||| || ||||| || || || | || || || ||||| |||| ||||| || |
Sbjct 61979 CGGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAG 61920
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421
||||| || || |||||||| || |||| || || || || |||| ||||| || |
Sbjct 61919 GAGGGATACCCTCCTTATCCTGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACT 61860
Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
| || || | ||||| ||||| || || |||||||||||||| ||||||||
Sbjct 61859 CGACCTCCAAGGTGATGGTCTTGCCCGTGAGAGTCTTGACGAAAATCTGCAT 61808
>seq615
Length=220600
Score = 111 bits (122), Expect = 4e-19
Identities = 132/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| || || || |||||| || ||||| || || || | || || || |||||||||
Sbjct 21219 TTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 21160
Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405
|| ||||| || | ||||| || || || |||||||| || || || ||||| ||
Sbjct 21159 AGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 21100
Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
|| | |||||||| || || ||||| || || ||||| || ||||| |||||||||||
Sbjct 21099 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATAGTCTTACCCGTCAGGGTCTTGACGAA 21041
>seq559
Length=127611
Score = 89.7 bits (98), Expect = 1e-12
Identities = 245/367 (67%), Gaps = 10/367 (3%)
Strand=Plus/Plus
Query 325967 ATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAAC--AGC 326024
||||| |||||||||| ||| |||| | || || | || ||| | |||||| |||
Sbjct 57144 ATAGGAGTGATGAACTCGATCAGGAACTCCGGGATCTTCAGCAGACT-GGGAAATTGAGC 57202
Query 326025 TATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCA 326084
|| | ||||| |||| | || || ||| | |||||| |||| |||||||
Sbjct 57203 C-TGAAGGAAGTTGATGAGCAAGCCCTTGATATGACTGCCGTCATGATCCTGATCGGTCA 57261
Query 326085 TGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCGGTTTGAA 326144
||||||||| ||||||||| || ||| | || || |||| | || | || |
Sbjct 57262 TGATCATCAAATGACCGTAGCGCAGCCCGCGGGTATCGGTGTATTCCTTCTTGTGCTGTA 57321
Query 326145 GGCCGAGAATTTGTTTGAGCGCTGTGATTTCTTCGTTCTTCGTGA--TGCTTGCCACGGA 326202
|||| || | | |||| | |||||| | |||||||| | |||| | | ||
Sbjct 57322 GGCCAAGGAAGTTCTTGATATTTTGGATTTCCTGGTTCTTCGAAATCTGCT--CAAAAGA 57379
Query 326203 TGCATCGCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGACC 326262
||||||||||| || | | |||||| || | ||||| || || | ||| | ||
Sbjct 57380 GGCATCGCGGACATTGAGCAATTTTCCTCGCAAGGGGAAGACACCGAAAAGGTCGGGTCC 57439
Query 326263 GACCACGGACAGCCCTGCGATTGCAAGTGTCGCT-GCGGAATCCCCCTCCGTCAGAATGA 326321
||| |||| |||| || || ||||| | | | || || || || || |||| |||||
Sbjct 57440 GACGACGGCTCGCCCAGCCATGGCAAG-GCCTTTAGCCGAGTCACCTTCGGTCAAAATGA 57498
Query 326322 GAGTGCA 326328
| |||||
Sbjct 57499 GGGTGCA 57505
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179644258289938
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |