Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq405 158 1e-33 seq615 95.1 1e-14 >seq405 Length=35189 Score = 158 bits (174), Expect = 1e-33 Identities = 308/450 (68%), Gaps = 19/450 (4%) Strand=Plus/Plus Query 52396 AGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCA 52455 ||||| | |||||||||||| || ||||| | ||||| || || ||||| ||| Sbjct 2475 AGCGCCTTGTGGCCTTCGCCGCTGTGGAGGGAATCTTTTTCTCTGGATCTTTTGCTTCCA 2534 Query 52456 TCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATAT 52515 |||| | | || | | ||| | ||||| || || || ||| ||||||| | || | Sbjct 2535 TCTTCTGGCTGAAGAAGCGTGGCTTGATGCCTGGTCTCACTTTCTCCAACGAGCTCATCT 2594 Query 52516 CGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGACCG 52575 | || ||||| ||||| ||||| |||||||| ||||| || | | | ||| | Sbjct 2595 CTCGTGACGAGGGACTACACACAGACTTTGCTTGCCTTCTCTTTT---CTCACTTGAACC 2651 Query 52576 AAAAATTGGATTCGGACACGA----TCCTGAGCATGTTCAAG--GAGGCGGTGGCTATCG 52629 | | | || ||| || | |||| || || | ||||| ||||| || | Sbjct 2652 A-----TCGCCCCG-ACAAGAAGGTTATTGAGGATATTATCGTTGAGGCTGTGGCCATTG 2705 Query 52630 AAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCA 52689 || ||||||| || || | ||| || || || | || |||||||||||| | || | Sbjct 2706 AACAGGAGTTCTTGACAGACGCTCTTCCTGTTGCTCTCCTGGGCATGAACTCTAAGCTAA 2765 Query 52690 TGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA--AA 52747 ||||| |||| || ||||| || || ||||| |||||||| |||| | | || || Sbjct 2766 TGTGCCAGTATATTGAGTTCGTTGCTGATCGGCTGTTGGT--TGCTCTTGGAAACAAGAA 2823 Query 52748 GTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGAC 52807 |||||||||| ||| ||| || || || || ||| | | || ||||||| || ||||| Sbjct 2824 GTACTTCAACTCTCCCAACCCCTTCGACTTCATGGAAAGTATCTCGCTTGCAGGAAAGAC 2883 Query 52808 CAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 ||||| || |||||||| || || || || Sbjct 2884 GAACTTCTTTGAGAAGCGTGTTGGTGACTA 2913 >seq615 Length=220600 Score = 95.1 bits (104), Expect = 1e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| ||||||||||||||||||| || || ||||| || || ||||| | ||| Sbjct 21221 CCTTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 21162 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTT 138544 | || ||||| ||||| || || ||||| || ||||| ||| || || | | | Sbjct 21161 TCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGT 21102 Query 138545 CCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAA 138604 | | ||||||| ||||||| || |||| || | || ||||| ||||| || || || | Sbjct 21101 CGATGGTGTCGCTCGACTCAACGTCGAGGGTAATAGTCTTACCCGTCAGGGTCTTGACGA 21042 Query 138605 AA 138606 || Sbjct 21041 AA 21040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496258237599120