Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq405 134 2e-26 seq586 93.3 5e-14 >seq405 Length=35189 Score = 134 bits (148), Expect = 2e-26 Identities = 348/522 (67%), Gaps = 24/522 (5%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| || || |||||||| |||||||| ||||| || | || |||| | ||||| Sbjct 2914 GTAGTCACCAACACGCTTCTCAAAGAAGTTCGTCTTTCCTGCAAGCGAGATACTTTCCAT 2855 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCA--AATTGTTGGCACCC----CAATCTGTTTGAG 127344 || || || ||||| ||||| | | || ||| || ||| | | Sbjct 2854 GAAGTCGAAGGGGTTGGGAGAGTTGAAGTACTTCTTGTTTCCAAGAGCAACC------AA 2801 Query 127345 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 127404 || ||||| | ||| ||||||| |||| |||| || ||||||||| || | ||| Sbjct 2800 CAGCCGATCAGCAACGAACTCAATATACTGGCACATTAGCTTAGAGTTCATGCCCAGGAG 2741 Query 127405 -GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGA 127463 | ||| || || ||||| | |||| ||| |||||| ||||||| || | | Sbjct 2740 AGCAACA-GGAAGAGCGTCTGTCAAGAACTCCTGTTCAATGGCCACAGCCTCAACGATAA 2682 Query 127464 TGGCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTTGAA-GAGTTCCACAGCA 127522 | | | |||| | | | || | || | | |||| || ||| |||| Sbjct 2681 TATCCTCAATAACCTTCTTGTCGGGGCGATGGT-TCAAGTGAGAAAAGAGAAGGCAAGCA 2623 Query 127523 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 127582 || ||| ||| || ||||||||||| |||||||| || || ||||| ||||| ||| Sbjct 2622 AAGTCTGTGTGTAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCAGGC 2563 Query 127583 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 127642 || | || |||||||||| |||||| || | | ||| || |||||||| ||||| ||| Sbjct 2562 ATCAAGCCACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCAGAGAAAAAGATTCCC 2503 Query 127643 TCCACACACGCGAACGCAAATAGACGCTCGGC-AAAGGAGCGGGACTTTGTATC---AAA 127698 |||||| ||||| || | || |||| || |||| | || | |||| || Sbjct 2502 TCCACAGCGGCGAAGGCCACAAGGCGCTGAGCGAAAGTA----GATTCCTTATCAGAAAT 2447 Query 127699 CCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGAC 127740 ||| |||| |||||||| ||||| ||| |||||| || || Sbjct 2446 CCATCTCATGGCCCACTGGGCCTTCTTCCTGATACAAGGAAC 2405 >seq586 Length=168373 Score = 93.3 bits (102), Expect = 5e-14 Identities = 327/508 (64%), Gaps = 7/508 (1%) Strand=Plus/Plus Query 116668 TAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAG 116727 || || || |||||||| ||||| | | |||| | || || || | || || ||| Sbjct 81206 TAAAGAGCATCAAACTCATCACCATAAACATCTGCCAAACCAGGGGCTTCATTGGGGCAG 81265 Query 116728 AAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGC 116787 || |||| ||| | ||| |||||| ||||||||||| || || ||| |||| ||| Sbjct 81266 AACAGAGTCCAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGC 81325 Query 116788 GCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAA 116847 || |||| ||||| || | |||| || | || || || || | |||| Sbjct 81326 GCGTAGAACAGATCACGGGCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAGG 81385 Query 116848 AAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---A 116904 || || | |||||| || ||||| || || ||||| | || | | || ||| Sbjct 81386 AACTCGAAGATATCGGCATGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAGGGCGCTTG 81445 Query 116905 CGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATA 116964 ||| |||||| |||||||| || || ||| || ||||||||||| |||| ||| Sbjct 81446 TTACCTCCCTGGTCGACATACCTAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATA 81505 Query 116965 CCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTGTTGGCTCTGACATCGTGGA 117022 || | ||| ||||| || || | || || ||| || |||| | || ||| | Sbjct 81506 CCGTTAGAGGACCCATTAGTGCCACCAATGTAGGAGCCT--GTGGCACGGATGCGGTGAA 81563 Query 117023 TGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGT 117082 || | || ||||| || || ||| ||||| || || | | || || ||| Sbjct 81564 CGTTAAGGCCGATACCGCCAGCTGTCTTCGAGATCATGGCACAAGTCTTAAGGGTGTCGT 81623 Query 117083 AGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCC 117142 |||| || || || || |||| | ||| ||||||||| || | || || Sbjct 81624 AGATACCCTCAATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGCAAGCTGGGGTT 81683 Query 117143 TTGGTGTACCAGCGTTGAAGAGGGTTGG 117170 || |||||||| ||||| || || || Sbjct 81684 GGGGAGTACCAGCATTGAACAGAGTAGG 81711 Score = 91.5 bits (100), Expect = 2e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 116415 GACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGT 116474 |||| | ||||||| |||| || ||||| || || |||| || || | || | Sbjct 80899 GACAAAAGTAGGAAGCGCGAGAGAAGCCAGGTTGCAGACAGCAACTTCGTCAGGAGCACT 80958 Query 116475 GTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 116534 |||||| || || ||||| || | ||| || || ||| || |||| |||||| || || Sbjct 80959 GTACTCAATGATCTCCGTGCAAAGATTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTT 81018 Query 116535 TGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGA 116594 ||| |||| || ||||||||||| |||||| | || | || ||||| || || | Sbjct 81019 GCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATAAAGGGGTTGCCAGTCTCGGTCTGAGC 81078 Query 116595 CTTGAGAATAGCCTTCCA 116612 || |||||||| | ||| Sbjct 81079 CTCAAGAATAGCATACCA 81096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613502054208360