Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20var._20RP-
2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq630 143 3e-29
seq615 105 8e-18
seq606 96.9 4e-15
>seq630
Length=388802
Score = 143 bits (158), Expect = 3e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
||||| |||| ||| ||||| ||||| || || ||||| |||||||| | || |||
Sbjct 62016 ACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAATCGGAAAGAGTGCGGCCATCCTCG 61957
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
||||||||||| ||||| ||||||||||||||||| | || | | |||||| |||
Sbjct 61956 AGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAGGAGGGATACCCTCCTTATCCTGA 61897
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
|||||| ||||| | | | |||||||| || || || |||| |||||||| |||
Sbjct 61896 ATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGACCTCCAAGGTGATGGTCTTG 61837
Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||||| || || || || || || |||||
Sbjct 61836 CCCGTGAGAGTCTTGACGAAAATCTGCAT 61808
Score = 127 bits (140), Expect = 2e-24
Identities = 160/217 (74%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||||| |||||| || | || ||||||||||| |||||||| ||||| || || | | |
Sbjct 62787 ACGCAGCACCAGGTGGAGCGTGCTCTCCTTTTGAATATTGTAATCGGAGAGGGTCCTCCC 62728
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
|| || | |||||| || ||||| || | ||||||||||| | || | || ||||||
Sbjct 62727 ATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTT 62668
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556
||| |||||| |||| | ||| | | | ||||||| || ||||| |||| || |
Sbjct 62667 GTCTTGGATCTTGCTCTTCA-CGTTGTCAATCGTGTCGGAGGACTCCACCTCCAGGGTAA 62609
Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| || || || || || || || ||||| |||||
Sbjct 62608 TGGTCTTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 62572
Score = 98.7 bits (108), Expect = 1e-15
Identities = 129/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||| || || || |||||||| | ||||| | || || | ||||||||| |||||
Sbjct 62306 TCCTTCTGAATGTTATAGTCGGACAAGGTGCGGCCATCCTCCAACTGCTTGCCAGCGAAA 62247
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
|||| ||||||||||| | || | | |||||||||| ||||||| ||| | |
Sbjct 62246 ATCAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTAACGTTA 62187
Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | || ||||| |||||||| || | || ||||| ||||| || || || || ||
Sbjct 62186 TCAATGGTATCGCTGGATTCCACCTCGAGAGTAATGGTCTTGCCAGTGAGGGTCTTGAC 62128
Score = 93.3 bits (102), Expect = 5e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|||||||||| ||| ||||||||||||||||| || || | || || | || ||
Sbjct 62552 ACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAATCAGACAAGGTACGGCCATCTTCA 62493
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|| ||||| || || || || | ||||| || || | || | | |||||| ||| |
Sbjct 62492 AGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCAGGAGGGATACCCTCCTTATCCTGG 62433
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
||||| |||||| | | | ||||| || || || || | ||||| || ||
Sbjct 62432 ATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCTACTTCTAATGTGATAGTCTTT 62373
Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||||| || || ||||| |||||||||||
Sbjct 62372 CCCGTGAGAGTCTTAACGAAGATTTGCAT 62344
>seq615
Length=220600
Score = 105 bits (116), Expect = 8e-18
Identities = 134/182 (74%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| || || ||||||||| || ||||| | || || |||||||| || ||||| |
Sbjct 21221 CCTTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 21162
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
||| |||||||||||| | || | | |||||||||| |||||| ||||| ||| |
Sbjct 21161 TCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTG 21103
Query 46524 CC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582
| | ||||||||||| || || || | || || || || |||||||| || || ||
Sbjct 21102 TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATAGTCTTACCCGTCAGGGTCTTGACG 21043
Query 46583 AA 46584
||
Sbjct 21042 AA 21041
>seq606
Length=198141
Score = 96.9 bits (106), Expect = 4e-15
Identities = 95/123 (77%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||| | ||| || |||| || |||||| ||||| |||||||| || || || || |
Sbjct 90796 ACGGAGCACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGACC 90855
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
||| |||||||||||||| ||||| |||| ||||||||||||| || | | ||||||
Sbjct 90856 GTCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCGGGGGGGATTCCCTCCTT 90915
Query 46498 GTC 46500
|||
Sbjct 90916 GTC 90918
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565233659062920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |