Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20var._20RP-
2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq630 123 2e-23
seq606 107 2e-18
seq615 105 7e-18
seq405 98.7 1e-15
>seq630
Length=388802
Score = 123 bits (136), Expect = 2e-23
Identities = 169/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| || || ||||| ||| | || || ||| || ||
Sbjct 62572 ATGCAGATCTTCGTCAAGACTCTCACCGGAAAGACCATTACCCTGGAGGTGGAGTCCTCC 62631
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | || |||| | |||| || |||| ||||| ||||| || || | ||||
Sbjct 62632 GACACGATTGACAACG--TGAAGAGCAAGATCCAAGACAAGGAGGGCATCCCTCCTGACC 62689
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||||| ||||| | ||| || || ||| |||| || | | | |||||| ||| ||||
Sbjct 62690 AGCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGGAGGACCCTCTCCGATTACA 62749
Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
| || |||||||| ||| ||||| || ||||||||||| || | || ||
Sbjct 62750 ATATTCAAAAGGAGAGC-ACGCTCCACCTGGTGCTGCGTCTGCGTGGTGG 62798
Score = 111 bits (122), Expect = 2e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||||||||| ||||||||| | || |||||| ||| |
Sbjct 61808 ATGCAGATTTTCGTCAAGACTCTCACGGGCAAGACCATCACCTTGGAGGTCGAGTCCAGC 61867
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | || || || | || || ||||| || || | |||||
Sbjct 61868 GACACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCAG 61927
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| | |||| ||| ||||| ||||| || || | ||||| || ||| || |||
Sbjct 61928 CAGCGCTTGATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTTTCCGATTATAAC 61987
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||| |||||| | || ||||| |||| || |||
Sbjct 61988 ATCCAGAAGGAATCTACTCTGCACCTGGTTCTCCGT 62023
Score = 95.1 bits (104), Expect = 1e-14
Identities = 161/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || |||||||| || || ||||| | || || ||| | |
Sbjct 62344 ATGCAAATCTTCGTTAAGACTCTCACGGGAAAGACTATCACATTAGAAGTAGAGTCTTCA 62403
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | | | || | | |||| || |||| || || ||||| || || | || |
Sbjct 62404 GACACCATCGACAATG--TCAAGAGCAAGATCCAGGATAAGGAGGGTATCCCTCCTGATC 62461
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
||||||| ||||| | || || || || || || || | || ||| | || ||||
Sbjct 62462 AACAGCGTCTCATCTTTGCTGGAAAGCAACTTGAAGATGGCCGTACCTTGTCTGATTACA 62521
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
| |||||||||||| | || |||||| |||| || ||| || | || |||
Sbjct 62522 ATATCCAAAAGGAATCCACACTGCATCTGGTCCTCCGTCTGCGTGGTGGC 62571
>seq606
Length=198141
Score = 107 bits (118), Expect = 2e-18
Identities = 104/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396
||||| |||||||| ||| ||||||| ||||| || || | ||| ||||| ||||| ||
Sbjct 90918 GACAAGGAGGGAATCCCCCCCGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAG 90859
Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456
|||| || |||||| |||||||||||||| ||||| |||| ||||| | |||||
Sbjct 90858 GACGGTCGTACCCTCTCTGACTACAACATCCAGAAGGAGTCGACCCTGCACCTCGTGCTC 90799
Query 38457 CGTTTGAGAGGCGG 38470
||| || | || ||
Sbjct 90798 CGTCTGCGTGGTGG 90785
>seq615
Length=220600
Score = 105 bits (116), Expect = 7e-18
Identities = 134/182 (74%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || || ||||| || || || ||| ||||||| ||| | | ||||| | |
Sbjct 21041 TTCGTCAAGACCCTGACGGGTAAGACTATTACCCTCGACGTTGAGTCGAGCGACACCATC 21100
Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371
| |||| | || | || |||| ||||| ||||| || ||| | ||||| ||||| ||
Sbjct 21101 GACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCT 21159
Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431
|| | ||| || || ||||| || || | |||||||| | |||||||||||| || ||
Sbjct 21160 GATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATTCAGAA 21219
Query 38432 GG 38433
||
Sbjct 21220 GG 21221
>seq405
Length=35189
Score = 98.7 bits (108), Expect = 1e-15
Identities = 146/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 132894 GCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAA 132953
|||||||||||| || | |||||||| | || ||||| |||||| |||||| |
Sbjct 2629 GCAAGCAAAGTCTGTGTGTAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAG 2570
Query 132954 GCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAA 133013
|| ||||| | ||| || || || ||||| || |||| || ||| || || || ||
Sbjct 2569 ACCAGGCATCAAGCCACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCAGAGAAAAA 2510
Query 133014 GACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGC 133073
|| ||||| || || ||||| ||||| ||||||| |||| || | ||| || |
Sbjct 2509 GATTCCCTCCACAGCGGCGAAGGCCACAAGGCGCTGAGCGAAAGTAGATTCCTTATCAGA 2450
Query 133074 GATCCAGCGCAGCGCCCATTCGGCCTT 133100
||||| | || ||||| | ||||||
Sbjct 2449 AATCCATCTCATGGCCCACTGGGCCTT 2423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500168604800640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |