Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq454 105 3e-17 seq630 100 1e-15 >seq454 Length=51108 Score = 105 bits (116), Expect = 3e-17 Identities = 196/287 (68%), Gaps = 12/287 (4%) Strand=Plus/Plus Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 || || || || || || ||||||||||| ||| ||||| || || || || || ||| Sbjct 18114 GCTGTCATCACCGTACCAGCTTATTTCAACGATAATCAACGTCAGGCGACGAAGGACGCA 18173 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441 || ||||| |||||||||||||| || || || ||||| || || || || ||| | Sbjct 18174 GGCGCCATTGCCGGTTTAAATGTTCTCCGCATCATCAATGAGCCCACTGCCGCCGCTATC 18233 Query 451442 GCATATGGACT------AGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTT 451495 || |||||||| |||||||| |||| |||| ||| | | ||| | Sbjct 18234 GCCTATGGACTCGGCTCCGGAAAATC---CGAAA---AAGAGCGTAATGTCCTGATATAT 18287 Query 451496 GATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAA 451555 ||| |||||||||| ||| ||| ||| | || ||| ||| || || || Sbjct 18288 GATCTTGGTGGAGGTACTTTCGATGTGTCTCTTCTCAACATTCAAGGAGGTGTTTTCACT 18347 Query 451556 GTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGA 451602 || ||||| || |||||||||||||| || || ||||| |||| Sbjct 18348 GTCAAGGCCACAGCCGGTGATACTCATCTCGGTGGACAAGATTTTGA 18394 >seq630 Length=388802 Score = 100 bits (110), Expect = 1e-15 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || |||||||| || || || || || ||||| || | || || || || || Sbjct 62344 ATGCAAATCTTCGTTAAGACTCTCACGGGAAAGACTATCACATTAGAAGTAGAGTCTTCA 62403 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | | || || || || |||||||| || || |||||||||||| Sbjct 62404 GACACCATCGACAATGTCAAGAGCAAGATCCAGGATAAGGAGGGTATCCCTCCTGATCAA 62463 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || || | || || |||||||||||||| | || ||| | ||||| ||| Sbjct 62464 CAGCGTCTCATCTTTGCTGGAAAGCAACTTGAAGATGGCCGTACCTTGTCTGATTACAAT 62523 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 || | ||||| | ||||| || Sbjct 62524 ATCCAAAAGGAATCCACACTGCA 62546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975701414378468