Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq531 304 2e-77 seq586 136 5e-27 seq612 134 2e-26 >seq531 Length=104979 Score = 304 bits (336), Expect = 2e-77 Identities = 491/703 (70%), Gaps = 6/703 (1%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||| || |||||||||| ||| || || || ||||| || ||||| || |||||||| Sbjct 68068 ATCGAAGTCCTCACCACCCAGGTGAGTGTCGCCAGCGGTAGCCTTGACCTCGAAGATACC 68127 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | |||||| | | | |||||||| || ||||||||||| || || || || || || Sbjct 68128 CTCCTCAATGGTCAGGAGGGAAACATCGAAAGTACCACCACCAAGATCGAAGATCAGGAC 68187 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 ||| ||| | || ||||| || |||||||| || || || || || || || || Sbjct 68188 GTTACGCTCGCCCTCGGCCTTCTTGTCAAGACCGTAGGCAATGGCAGCGGCAGTAGGCTC 68247 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || ||||| || ||||||||| || || | ||||| || || || || || Sbjct 68248 GTTGATGATACGGAGGACGTTCAGGCCGGCGATGAGACCAGCATCCTTGGTGGCCTGACG 68307 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || || ||||| |||||||| ||||| || | ||| |||| |||| | |||||| Sbjct 68308 CTGAGAGTCGTTGAAGTAGGCGGGGACGGTGATGACAGCGTTGTTGACAGTGCCACCGAG 68367 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815 || | ||| ||| | || ||| || || || ||||| || || |||||||||| | Sbjct 68368 GTAGGCTTCAGCGGTCTCACGCATCTTAGTCAGGACCATGGAGGAGATCTCTTCAGGGGT 68427 Query 7816 AAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGG 7875 ||||| || || || || || || ||||| ||||| ||||| || |||| | Sbjct 68428 GAACTGCTTGGTCTCGCCCTTGAACTCAACCTCAATGATGGGCTT-GCCGC--CCTTCTC 68484 Query 7876 GATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCT 7935 || |||||| | | ||| | |||||||| || |||| || ||| | Sbjct 68485 GACAACCTTGAAAGGCCAGTGCTTCATATCAGACTGAACCTCAGCATCTTGGAACCGACG 68544 Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995 ||||| |||||||| ||||| ||||| ||||| | ||||||||||| || ||||| Sbjct 68545 ACCGATCAGACGCTTAGCATCGAAAACGGTGTTGTGAGGGTTCATGGCGACCTGATTCTT 68604 Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGT 8055 || || || ||||| ||||| || | || ||||| || ||| |||| || || || Sbjct 68605 GGCGGCATCACCGATGAGACGCTC---GGTGTCGGTAAAAGCCACGAACGAGGGAGTAGT 68661 Query 8056 TCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115 || || || |||||||| ||||| ||||| | |||||| | | |||| || || || Sbjct 68662 ACGGTTACCCTGGTCGTTGGCAATGATTTCAATGCGGTCATCTCTGAAGACACCCACACA 68721 Query 8116 CGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCATT 8158 || || || || || || |||||||||| || ||| |||| Sbjct 68722 GGAGTAGGTGGTACCCAAGTCAATACCGACAGCGGGAGCCATT 68764 >seq586 Length=168373 Score = 136 bits (150), Expect = 5e-27 Identities = 396/608 (65%), Gaps = 15/608 (2%) Strand=Plus/Plus Query 105472 TCGTAAAGATCTTCAAACTCTTTACCGTACACGTCTGAAAGACCCTTTGCCTGATCAGGA 105531 || |||||| | |||||||| | ||| || || |||| | ||| || | || || Sbjct 81203 TCATAAAGAGCATCAAACTCATCACCATAAACATCTGCCAAACCAGGGGCTTCATTGGGG 81262 Query 105532 CAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCTGGAATCCAC 105591 || |||| | ||| | ||| | ||| ||||| || |||||||||| ||| || ||||| Sbjct 81263 CAGAACAGAGTCCAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCAC 81322 Query 105592 ATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGAATTTCG 105651 | || | || || || || || | || || | ||| || ||| |||| || Sbjct 81323 AGCGCGTAGAACAGATCACGGGCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCC 81382 Query 105652 AGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAGACCCTTTACGA 105711 || || |||| |||||||| ||||| || || | || | |||| || || | | Sbjct 81383 AGGAACTCGAAGATATCGGCATGCCAAGGCTCGAGGTAAATAGCAAAAGCGCC---AGGG 81439 Query 105712 CGC------CCCGCTTGATTGACATATCTTGCGGTTGAGTTATACACTCGTAACATTGGA 105765 ||| || | || | |||||| || || || ||| |||| || | ||| ||| Sbjct 81440 CGCTTGTTACCTCCCTGGTCGACATACCTAGCAGTGTTGTTGAACACGCGAAGCATGGGA 81499 Query 105766 ATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTATTTGCACGTACATCG 105825 | |||||| | || | ||||| || |||| ||| | || | ||||| | | Sbjct 81500 ACAATACCGTTAGAGGACCCATTAGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGG 81559 Query 105826 TGAACGTGTAACCCAATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTA 105885 ||||||| | || ||||| ||||| ||| ||| ||||| || | || Sbjct 81560 TGAACGTTAAGGCCGATACCGCCAGCTGTCTTCGAGATCATGGCACAAGTCTTAAGGGTG 81619 Query 105886 TCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAAACACGATGACATTTGT 105945 ||||| ||||| || || ||||| ||||| | | | ||||| || || | | || Sbjct 81620 TCGTAGATACCCTCAATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGCAAGCTGG 81679 Query 105946 GGTCTGGGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGAATGAACAAACCTTTC--- 106002 ||| ||| |||||||||||||||||||| || | |||||| |||| | |||| Sbjct 81680 GGTTGGGGAGTACCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTA---TTTCTGA 81736 Query 106003 GATAACGCTTCGTATGTTTCCAGGACGTGATCAATATCGTGTCCATGAATACCAATAGCG 106062 || | | ||| || || | | | | ||||||| || |||||||| |||| || Sbjct 81737 GACATGAGGTGGTAGGTCTCAATGGCCTTTTCAATATTGTTGCCATGAATGCCAACCGCA 81796 Query 106063 ACGCGCAT 106070 || ||||| Sbjct 81797 ACACGCAT 81804 >seq612 Length=208117 Score = 134 bits (148), Expect = 2e-26 Identities = 158/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 7596 TCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGT 7655 |||| || |||||||| || ||||| || ||||| || ||||| | || ||| ||| || Sbjct 19607 TCTTGTCCAGACCGTAGGCAATAGCGGCGGCCGTGGGCTCATTGACAACACGGAGAACGT 19666 Query 7656 TCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGG 7715 ||||||||||||| || | ||||| || || || |||| || | ||||| ||||||| Sbjct 19667 TCAGGCCAGCAATGGTGCCAGCATCCTTGGTAGCCTGTCTCTGGGCGTCGTTGAAGTAGG 19726 Query 7716 CCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTT 7775 | || || || || || |||| || || ||||| ||||| || || |||||||| | Sbjct 19727 CGGGAACAGTGACAACAGCGTGGGTAACCTTCTTTCCGAGGTAGCCCTCAGCGATATCCT 19786 Query 7776 TCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 |||| || ||| ||||| | |||| ||| || Sbjct 19787 TCATCTTTCCAAGGACCATGGCGGAAACCTCCTC 19820 Score = 86.0 bits (94), Expect = 8e-12 Identities = 123/173 (71%), Gaps = 3/173 (2%) Strand=Plus/Plus Query 7973 GGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTA 8032 |||||| ||| ||||||||| || ||||| || | ||||| || | || | || Sbjct 20037 GGGTTCGAGGCGTATTGGTTCTTGGCGGCGTCACCAACCAGACGCTCTTCAT---CAGTG 20093 Query 8033 AACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGG 8092 || ||||| || || || || | || || ||||||||||| || || ||||| || Sbjct 20094 AAGGCGACATAGGAAGGAGTGATACGGTTTCCTTGGTCGTTGGCGATGATTTCAACCTTT 20153 Query 8093 TCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 |||| ||| || ||||| || || || |||||||| | ||| |||||||| Sbjct 20154 CCGTTCTGCATCACACCGACACAAGAGTATGTTGTTCCAAGATCGATACCGAT 20206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635127472823640