Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq619 98.7 1e-15 seq405 95.1 1e-14 seq532 86.0 7e-12 seq480 84.2 3e-11 >seq619 Length=233136 Score = 98.7 bits (108), Expect = 1e-15 Identities = 221/326 (68%), Gaps = 6/326 (2%) Strand=Plus/Minus Query 11674 TTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGT 11733 ||||| | ||| || || ||||| ||||| | ||| || || || || || | Sbjct 32403 TTACCAATAGCATCGATTTCATCAATGAAGATGATGCAAGGGGCATTCTTCCGGGCGTTG 32344 Query 11734 TCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG-- 11791 ||||||| ||||| ||||| | || ||||| ||||||||||| ||||| | | Sbjct 32343 GCGAAAAGATCACGGACACGGGAAGGACCGACACCAACGAACATCTCGACGAACTCGGAA 32284 Query 11792 CGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851 | || || | ||||| ||| || || || |||||||| |||| ||||| | | Sbjct 32283 CCGCTGA-CGCTGAA-GAAAGGCACGCCGGATTCACCAGCAGTGGCCTTTGCGAGCAATG 32226 Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC-ACTT 11910 ||||||| || || || | ||| | ||| | ||| || || |||||||||||||| | || Sbjct 32225 TCTTACCTGTGCCGGGAGGACCTGAGAGGATGGCACCGCGAGGGATCTTGGCACCGAGTT 32166 Query 11911 CCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCG 11970 | | | ||||| ||||||||||| || | |||| | ||| | || || Sbjct 32165 TC-TGGAACTTTTCAGGAGTCTTGAGGAAGCTGACGAACTCCATGATTTCGACTTTTGCT 32107 Query 11971 GAGTCGATACCCTCAACATCGGTGAA 11996 ||| |||||| |||| |||| ||| Sbjct 32106 TCGTCCATACCCGCAACGTCGGAGAA 32081 >seq405 Length=35189 Score = 95.1 bits (104), Expect = 1e-14 Identities = 117/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 119496 GCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCA 119555 ||||| ||| || || || || || |||||||||||||| || ||| || ||| Sbjct 2625 GCAAAGTCTGTGTGTAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCA 2566 Query 119556 GGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATG 119615 ||||| | || | ||||| ||||| ||||||| | |||| |||||| || ||||| Sbjct 2565 GGCATCAAGCCACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCAGAGAAAAAGATT 2506 Query 119616 CCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAG 119655 ||||||||| |||||| || | || |||| ||| |||| Sbjct 2505 CCCTCCACAGCGGCGAAGGCCACAAGGCGCTGAGCGAAAG 2466 >seq532 Length=105535 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||| ||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 65863 TAGCTCAGTCGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 65804 Query 136777 GGGAACA 136783 |||| || Sbjct 65803 GGGACCA 65797 >seq480 Length=62346 Score = 84.2 bits (92), Expect = 3e-11 Identities = 184/276 (67%), Gaps = 0/276 (0%) Strand=Plus/Minus Query 11725 CGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACG 11784 || || ||| | ||||||||||| |||||||| || || ||||| || ||| |||| || Sbjct 10739 CGGGCTTGTGCAAAAAGTTCACGAACACGCTTGGCGCCGACACCCACATACACCTCATCG 10680 Query 11785 AAGTTTGCGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCG 11844 || | | |||| | | ||| |||||| || || || |||| || || || Sbjct 10679 AATTCGGAACCAGACATGTAGAAGAATGGAACACCAGCTTCTCCGGCGACAGCACGGGCA 10620 Query 11845 AGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCA 11904 || | ||||| || |||||||| | || | ||||| | || || | ||| || Sbjct 10619 AGCAAGGTCTTTCCTGTACCAGGAGGTCCCACAAGAAGCACACCCTTTGGCAATTTGCCA 10560 Query 11905 CCACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCC 11964 || | || | ||||| || ||| ||||| || |||| |||| || || ||| Sbjct 10559 CCGAGGGAAGAGAATCGCTCCGGATTCAGCAGGAATTCGACAAGTTCCTGGAGCTCTTCC 10500 Query 11965 TTGGCGGAGTCGATACCCTCAACATCGGTGAAACGA 12000 ||||| |||| ||| | ||||||| ||| ||| Sbjct 10499 TTGGCCTCGTCGCAACCATGTACATCGGAGAACCGA 10464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588971059963800