Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20var._20RP-
2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq619 98.7 1e-15
seq405 95.1 1e-14
seq532 86.0 7e-12
seq480 84.2 3e-11
>seq619
Length=233136
Score = 98.7 bits (108), Expect = 1e-15
Identities = 221/326 (68%), Gaps = 6/326 (2%)
Strand=Plus/Minus
Query 11674 TTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGT 11733
||||| | ||| || || ||||| ||||| | ||| || || || || || |
Sbjct 32403 TTACCAATAGCATCGATTTCATCAATGAAGATGATGCAAGGGGCATTCTTCCGGGCGTTG 32344
Query 11734 TCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG-- 11791
||||||| ||||| ||||| | || ||||| ||||||||||| ||||| | |
Sbjct 32343 GCGAAAAGATCACGGACACGGGAAGGACCGACACCAACGAACATCTCGACGAACTCGGAA 32284
Query 11792 CGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851
| || || | ||||| ||| || || || |||||||| |||| ||||| | |
Sbjct 32283 CCGCTGA-CGCTGAA-GAAAGGCACGCCGGATTCACCAGCAGTGGCCTTTGCGAGCAATG 32226
Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC-ACTT 11910
||||||| || || || | ||| | ||| | ||| || || |||||||||||||| | ||
Sbjct 32225 TCTTACCTGTGCCGGGAGGACCTGAGAGGATGGCACCGCGAGGGATCTTGGCACCGAGTT 32166
Query 11911 CCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCG 11970
| | | ||||| ||||||||||| || | |||| | ||| | || ||
Sbjct 32165 TC-TGGAACTTTTCAGGAGTCTTGAGGAAGCTGACGAACTCCATGATTTCGACTTTTGCT 32107
Query 11971 GAGTCGATACCCTCAACATCGGTGAA 11996
||| |||||| |||| |||| |||
Sbjct 32106 TCGTCCATACCCGCAACGTCGGAGAA 32081
>seq405
Length=35189
Score = 95.1 bits (104), Expect = 1e-14
Identities = 117/160 (73%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 119496 GCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCA 119555
||||| ||| || || || || || |||||||||||||| || ||| || |||
Sbjct 2625 GCAAAGTCTGTGTGTAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCA 2566
Query 119556 GGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATG 119615
||||| | || | ||||| ||||| ||||||| | |||| |||||| || |||||
Sbjct 2565 GGCATCAAGCCACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCAGAGAAAAAGATT 2506
Query 119616 CCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAG 119655
||||||||| |||||| || | || |||| ||| ||||
Sbjct 2505 CCCTCCACAGCGGCGAAGGCCACAAGGCGCTGAGCGAAAG 2466
>seq532
Length=105535
Score = 86.0 bits (94), Expect = 7e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776
||||||||| ||||||||||||||||| |||||||||||||| || |||||| || |||
Sbjct 65863 TAGCTCAGTCGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 65804
Query 136777 GGGAACA 136783
|||| ||
Sbjct 65803 GGGACCA 65797
>seq480
Length=62346
Score = 84.2 bits (92), Expect = 3e-11
Identities = 184/276 (67%), Gaps = 0/276 (0%)
Strand=Plus/Minus
Query 11725 CGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACG 11784
|| || ||| | ||||||||||| |||||||| || || ||||| || ||| |||| ||
Sbjct 10739 CGGGCTTGTGCAAAAAGTTCACGAACACGCTTGGCGCCGACACCCACATACACCTCATCG 10680
Query 11785 AAGTTTGCGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCG 11844
|| | | |||| | | ||| |||||| || || || |||| || || ||
Sbjct 10679 AATTCGGAACCAGACATGTAGAAGAATGGAACACCAGCTTCTCCGGCGACAGCACGGGCA 10620
Query 11845 AGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCA 11904
|| | ||||| || |||||||| | || | ||||| | || || | ||| ||
Sbjct 10619 AGCAAGGTCTTTCCTGTACCAGGAGGTCCCACAAGAAGCACACCCTTTGGCAATTTGCCA 10560
Query 11905 CCACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCC 11964
|| | || | ||||| || ||| ||||| || |||| |||| || || |||
Sbjct 10559 CCGAGGGAAGAGAATCGCTCCGGATTCAGCAGGAATTCGACAAGTTCCTGGAGCTCTTCC 10500
Query 11965 TTGGCGGAGTCGATACCCTCAACATCGGTGAAACGA 12000
||||| |||| ||| | ||||||| ||| |||
Sbjct 10499 TTGGCCTCGTCGCAACCATGTACATCGGAGAACCGA 10464
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588971059963800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |