Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq531 98.7 8e-15 >seq531 Length=104979 Score = 98.7 bits (108), Expect = 8e-15 Identities = 352/547 (64%), Gaps = 4/547 (1%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||| | ||||| || || || ||||| || ||||| ||||| | | ||| Sbjct 68754 GCTGTCGGTATTGACTTGGGTACCACCTACTCCTGTGTGGGTGTCTTCAGAGATGACCGC 68695 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 ||||||| |||||||| || || |||||| | |||||||| || | || |||| || Sbjct 68694 ATTGAAATCATTGCCAACGACCAGGGTAACCGTACTACTCCCTCGTTCGTGGCTTTTACC 68635 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || || || | | | | |||||||| || || |||| | | | || ||| ||| Sbjct 68634 GACACCGAGCGTCTCATCGGTGATGCCGCCAAGAATCAGGTCGCCATGAACCCTCACAAC 68575 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || |||| |||||||| ||| | || || | | || | ||| | |||||| | Sbjct 68574 ACCGTTTTCGATGCTAAGCGTCTGATCGGTCGTCGGTTCCAAGATGCTGAGGTTCAGTCT 68515 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291 ||||||||||| ||||||||| | |||| | || || || ||||| | | Sbjct 68514 GATATGAAGCACTGGCCTTTCAAGGTTGTCGAGAAGGGCGGCAAGCCCATCATTGAGGTT 68455 Query 550292 -ACTCATGAAGGATCTG-TTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAA 550349 | | | |||| | || || || | || ||| | || || || ||||| | | Sbjct 68454 GAGT--TCAAGGGCGAGACCAAGCAGTTCACCCCTGAAGAGATCTCCTCCATGGTCCTGA 68397 Query 550350 TGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAA 550409 || ||| | || || || | | ||| || | | || || || | Sbjct 68396 CTAAGATGCGTGAGACCGCTGAAGCCTACCTCGGTGGCACTGTCAACAACGCTGTCATCA 68337 Query 550410 CTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTG 550469 | || || || || || || ||||| || ||||| || || || |||||||| | || | Sbjct 68336 CCGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCCACCAAGGATGCTGGTCTCATCG 68277 Query 550470 CTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGAC 550529 | || || || || || ||||| ||||| || |||||||| ||||| |||| || || | Sbjct 68276 CCGGCCTGAACGTCCTCCGTATCATCAACGAGCCTACTGCCGCTGCCATTGCCTACGGTC 68217 Query 550530 TTGATAA 550536 |||| || Sbjct 68216 TTGACAA 68210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029260514493790