Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20var._20RP-
2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq531 98.7 8e-15
>seq531
Length=104979
Score = 98.7 bits (108), Expect = 8e-15
Identities = 352/547 (64%), Gaps = 4/547 (1%)
Strand=Plus/Minus
Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051
||| | ||||| || || || ||||| || ||||| ||||| | | |||
Sbjct 68754 GCTGTCGGTATTGACTTGGGTACCACCTACTCCTGTGTGGGTGTCTTCAGAGATGACCGC 68695
Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111
||||||| |||||||| || || |||||| | |||||||| || | || |||| ||
Sbjct 68694 ATTGAAATCATTGCCAACGACCAGGGTAACCGTACTACTCCCTCGTTCGTGGCTTTTACC 68635
Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171
|| || || | | | | |||||||| || || |||| | | | || ||| |||
Sbjct 68634 GACACCGAGCGTCTCATCGGTGATGCCGCCAAGAATCAGGTCGCCATGAACCCTCACAAC 68575
Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231
|| |||| |||||||| ||| | || || | | || | ||| | |||||| |
Sbjct 68574 ACCGTTTTCGATGCTAAGCGTCTGATCGGTCGTCGGTTCCAAGATGCTGAGGTTCAGTCT 68515
Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291
||||||||||| ||||||||| | |||| | || || || ||||| | |
Sbjct 68514 GATATGAAGCACTGGCCTTTCAAGGTTGTCGAGAAGGGCGGCAAGCCCATCATTGAGGTT 68455
Query 550292 -ACTCATGAAGGATCTG-TTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAA 550349
| | | |||| | || || || | || ||| | || || || ||||| | |
Sbjct 68454 GAGT--TCAAGGGCGAGACCAAGCAGTTCACCCCTGAAGAGATCTCCTCCATGGTCCTGA 68397
Query 550350 TGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAA 550409
|| ||| | || || || | | ||| || | | || || || |
Sbjct 68396 CTAAGATGCGTGAGACCGCTGAAGCCTACCTCGGTGGCACTGTCAACAACGCTGTCATCA 68337
Query 550410 CTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTG 550469
| || || || || || || ||||| || ||||| || || || |||||||| | || |
Sbjct 68336 CCGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCCACCAAGGATGCTGGTCTCATCG 68277
Query 550470 CTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGAC 550529
| || || || || || ||||| ||||| || |||||||| ||||| |||| || || |
Sbjct 68276 CCGGCCTGAACGTCCTCCGTATCATCAACGAGCCTACTGCCGCTGCCATTGCCTACGGTC 68217
Query 550530 TTGATAA 550536
|||| ||
Sbjct 68216 TTGACAA 68210
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029260514493790
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |