Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq596 93.3 3e-14 >seq596 Length=181484 Score = 93.3 bits (102), Expect = 3e-14 Identities = 184/270 (68%), Gaps = 2/270 (1%) Strand=Plus/Minus Query 30115 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAA 30174 ||||| || || ||| || | ||| || | | | ||| ||||||| || |||||| Sbjct 64233 AGCTGGTCGACGCCCTGGCCTGTGTAATCCGTCTTGGCGTCGATGTACTCGGCCCCGAAA 64174 Query 30175 TGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCC 30234 |||| |||||||||||| ||||| || || || || || | || | |||| ||| |||| Sbjct 64173 TGCCGCCACTGGAACCCATACACAGGGCCTAGATCGCCGACCTCGCGGTGCCCGA-GCCC 64115 Query 30235 CTCTT-GTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGA 30293 ||| ||||| || || | | ||||| |||||||||| || | || || || Sbjct 64114 AACTTTGTCCAGGAACTCGCGGCTGCCGTTACCGTCCCAGATTTTGATGCCTGCTTCCGA 64055 Query 30294 GAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTT 30353 ||| ||||| ||| | || || |||||| || ||||| | | |||||| Sbjct 64054 GAGGGGGATGGAGGAGGTGCATCCGGAGATGAACCAGAGGAGCTCGGCGATGACGGCACG 63995 Query 30354 CCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383 | || || | ||||| ||||||||||| Sbjct 63994 CAGGAAAACGCGTTTGGTGGTGAGGAGGGG 63965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408614258401883