Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq405 154 3e-32 >seq405 Length=35189 Score = 154 bits (170), Expect = 3e-32 Identities = 349/521 (67%), Gaps = 19/521 (4%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | |||||||||||||| ||||| || | | |||||| | || Sbjct 2917 CTGGTAGTCACCAACACGCTTCTCAAAGAAGTTCGTCTTTCCTGCAAGCGAGATACTTTC 2858 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGT---CAGGCCCATCTGTTCC 47953 ||||||| |||||||||||| | ||| | | | ||| || | || | | Sbjct 2857 CATGAAGTCGAAGGGGTTGGGAGAGTTGAAGTACTTCTTGTTTCCAAGAGCAAC-----C 2803 Query 47954 AGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATG 48013 | ||| |||| || ||| |||| || || | |||| || | ||||||||| | | Sbjct 2802 AACAGCCGATCAGCAACGAACTCAATATACTGGCACATTAGCTTAGAGTTCATGCCCAGG 2743 Query 48014 AGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073 || | || || | ||| | ||| | ||||||| || || ||| || || | | | Sbjct 2742 AGAGCAACAGGAAGAGCGTCTGTCAAGAACTCCTGTTCAATGGCCACAGCCTCAACGATA 2683 Query 48074 ATCTGCT---TAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATG 48130 || | || |||| || | | | | ||| || ||| | | |||| | | Sbjct 2682 ATATCCTCAATAACCTTCTTGTCGGGGCGATGGTT---CAAGTGA---GAAAAGAGAAGG 2629 Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 || |||||||| |||| | || ||||| || ||||||| |||||||||| |||| Sbjct 2628 CAAGCAAAGTCTGTGTGTAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGA 2569 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 |||||||| | || | || || |||||||| || | || ||||| |||||||| ||| Sbjct 2568 CCAGGCATCAAGCCACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCAGAGAAAAAG 2509 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 || |||||||| || ||||| || || | || |||||| || | ||| || || Sbjct 2508 ATTCCCTCCACAGCGGCGAAGGCCACAAGGCGCTGAGCGAAAGTAGATTCCTTATCAGAA 2449 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 ||||| | ||||| | ||||||||| |||| || || Sbjct 2448 ATCCATCTCATGGCCCACTGGGCCTTCTTCCTGATACAAGG 2408 Score = 107 bits (118), Expect = 4e-18 Identities = 174/250 (70%), Gaps = 3/250 (1%) Strand=Plus/Minus Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 |||| || || | ||||| || |||||||| ||||||||| | |||||| || Sbjct 2278 TCTCCGAATGAATGTTCTCAATCATAATCTGGAAGCCGTAGAAGCATCGAGCCTCAGGCA 2219 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 ||||||| || || ||| | ||||| || |||||||| || || || || || |||| Sbjct 2218 CCTGCACCTCATTGCTGAAGCGCTCCAACAAGTTCTCATTAACGATTCCGTCAGAGGCAG 2159 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGA---GCATTCC 48605 | ||||||||||||||||| | ||||| ||||| | || | ||| |||| Sbjct 2158 CGAAGAAGGCAAGGACATGAGAGATGAAATAACGCTCATCGTCATTCAGACGGTTGTTCC 2099 Query 48606 AGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTT 48665 || | || | |||||| || || | || || | ||||||||||| || |||| Sbjct 2098 AGTCGTGCAGATCTTTGGAGAGATCAATCTCCTCGGCGGTCCAGAAGGAAGCTTCGGCTT 2039 Query 48666 TTTTGTACAT 48675 | |||||||| Sbjct 2038 TCTTGTACAT 2029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931524986768640