Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq405 122 2e-22 >seq405 Length=35189 Score = 122 bits (134), Expect = 2e-22 Identities = 163/224 (73%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 25816 ATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGC 25875 |||| || |||||| | ||||||||||| ||||| || |||| || | Sbjct 2414 ATCAGGAAGAAGGCCCAGTGGGCCATGAGATGGATTTCTGATAAGGAATCTACTTTCGCT 2473 Query 25876 GAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCC 25935 |||| || || ||||| || ||||||||||| ||||||||| || || ||||| || Sbjct 2474 CAGCGCCTTGTGGCCTTCGCCGCTGTGGAGGGAATCTTTTTCTCTGGATCTTTTGCTTCC 2533 Query 25936 ATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCAT 25994 ||||||||||| ||| || || ||||| || || ||||| |||||||||||||| Sbjct 2534 ATCTTCTGGCTGAAGAAGCGTGGCTTGATGCCTGGTCT-CACTTTCTCCAACGAGCTCAT 2592 Query 25995 CAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCT 26038 | | |||||||| || |||| ||| ||||| ||||| |||| Sbjct 2593 CTCTCGTGACGAGGGACTACACACAGACTTTGCTTGCCTTCTCT 2636 Score = 89.7 bits (98), Expect = 1e-12 Identities = 162/234 (69%), Gaps = 5/234 (2%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | ||||||||||| || || || |||||||||||| ||||||||||| Sbjct 2020 ATTTGGCAAATGTACAAGAAAGCCGAAGCTTCCTTCTGGACCGCCGAGGAGATTGATCTC 2079 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT-- 25594 |||| || || ||| |||| || | || ||||| ||| || | ||| | Sbjct 2080 TCCAAAGATCTGCACGACTGGAACAACCGTCTGAATGACGATGAGCGTTATTTCATCTCT 2139 Query 25595 -ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 | || | || ||||| || |||||||| || || || || ||||| ||| ||| | Sbjct 2140 CATGTCCTTGCCTTCTTCGCTGCCTCTGACGGAATCGTTAATGAGAACTTGTTGGAGCGC 2199 Query 25654 TTCACCAGGGAAGTGCA-GTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 |||| || || ||||| || | | ||||| || |||||||| |||||||| Sbjct 2200 TTCAGCAATGAGGTGCAGGTGCCT-GAGGCTCGATGCTTCTACGGCTTCCAGAT 2252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928837009314240