Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq573 111 5e-19 seq447 91.5 4e-13 >seq573 Length=142936 Score = 111 bits (122), Expect = 5e-19 Identities = 109/140 (78%), Gaps = 3/140 (2%) Strand=Plus/Plus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| |||||||| |||| ||||| ||| |||| ||||||||| Sbjct 101465 AGAATTTCCTTGAGACGAGGAACACCGAGGGTGACGTT---CTTCGACGAGACACCAGCA 101521 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 |||||||||||||||| || | || |||| |||||||||||| || || || | | Sbjct 101522 AAGTGGAAAGTATTCAAGGTCATCTGTGTAGCGGGCTCACCAATAGACTGAGCGGCTAGC 101581 Query 301933 ATACCAACCATTTCTCCTGG 301952 | |||||||||||| ||||| Sbjct 101582 ACACCAACCATTTCACCTGG 101601 >seq447 Length=47921 Score = 91.5 bits (100), Expect = 4e-13 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 |||||||| | ||||||||||||||| ||||| || |||||||| |||||||| || || Sbjct 31806 GCACCGTGCGCAATCATACAATCACGTTCCATCTCTCCGAAACGCAGACCACCGTCACGG 31747 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGA 251574 || ||||| || ||||||| || || ||| Sbjct 31746 GCTCTACCTTCCACAGGCTGCCGGGTCAGA 31717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471804946508127