Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20var._20RP-
2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq573 111 5e-19
seq447 91.5 4e-13
>seq573
Length=142936
Score = 111 bits (122), Expect = 5e-19
Identities = 109/140 (78%), Gaps = 3/140 (2%)
Strand=Plus/Plus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||| | | ||| |||||||| |||| ||||| ||| |||| |||||||||
Sbjct 101465 AGAATTTCCTTGAGACGAGGAACACCGAGGGTGACGTT---CTTCGACGAGACACCAGCA 101521
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
|||||||||||||||| || | || |||| |||||||||||| || || || | |
Sbjct 101522 AAGTGGAAAGTATTCAAGGTCATCTGTGTAGCGGGCTCACCAATAGACTGAGCGGCTAGC 101581
Query 301933 ATACCAACCATTTCTCCTGG 301952
| |||||||||||| |||||
Sbjct 101582 ACACCAACCATTTCACCTGG 101601
>seq447
Length=47921
Score = 91.5 bits (100), Expect = 4e-13
Identities = 74/90 (82%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
|||||||| | ||||||||||||||| ||||| || |||||||| |||||||| || ||
Sbjct 31806 GCACCGTGCGCAATCATACAATCACGTTCCATCTCTCCGAAACGCAGACCACCGTCACGG 31747
Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGA 251574
|| ||||| || ||||||| || || |||
Sbjct 31746 GCTCTACCTTCCACAGGCTGCCGGGTCAGA 31717
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471804946508127
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |