Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20var._20RP-
2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq630 122 8e-23
seq586 107 2e-18
>seq630
Length=388802
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || ||||| || || ||||| || || || || || ||
Sbjct 62572 ATGCAGATCTTCGTCAAGACTCTCACCGGAAAGACCATTACCCTGGAGGTGGAGTCCTCC 62631
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||||||||| || || || ||||| || ||
Sbjct 62632 GACACGATTGACAACGTGAAGAGCAAGATCCAAGACAAGGAGGGCATCCCTCCTGACCAG 62691
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | ||||| || || || ||| |||| ||| ||| | | | || ||||| ||
Sbjct 62692 CAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGGAGGACCCTCTCCGATTACAAT 62751
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||||||||| || || ||| ||||| |||| |||| || ||
Sbjct 62752 ATTCAAAAGGAGAGCACGCTCCACCTGGTGCTGCGTCTGCGTGGTGG 62798
Score = 111 bits (122), Expect = 1e-19
Identities = 140/190 (74%), Gaps = 2/190 (1%)
Strand=Plus/Plus
Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGA-AAC 24777
|| || || || || || || ||||| ||||| || ||| ||| ||| || | || |||
Sbjct 62131 AAGACCCTCACTGGCAAGACCATTACTCTCGAGGTGGAATCCAGCGATACCATTGATAAC 62190
Query 24778 GGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTT 24837
| ||| | || |||||| ||||| || || || ||||| || || || ||| |||| ||
Sbjct 62191 GTTAAGTCGAA-GATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTGATTTT 62249
Query 24838 TGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATC 24897
|| || || ||| |||||||| | | | |||| || ||||||||||| ||||||||
Sbjct 62250 CGCTGGCAAGCAGTTGGAGGATGGCCGCACCTTGTCCGACTATAACATTCAGAAGGAATC 62309
Query 24898 GACACTACAC 24907
||| || |||
Sbjct 62310 GACTCTCCAC 62319
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| |||| || || || || || ||||| || | |||||||| | |
Sbjct 62344 ATGCAAATCTTCGTTAAGACTCTCACGGGAAAGACTATCACATTAGAAGTAGAGTCTTCA 62403
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| || || || || || ||||| ||||||
Sbjct 62404 GACACCATCGACAATGTCAAGAGCAAGATCCAGGATAAGGAGGGTATCCCTCCTGATCAA 62463
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | |||||||| || || || || || ||| | | | |||| ||||| ||
Sbjct 62464 CAGCGTCTCATCTTTGCTGGAAAGCAACTTGAAGATGGCCGTACCTTGTCTGATTACAAT 62523
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| ||||||||||| ||||| || |||| | || |||| || |||
Sbjct 62524 ATCCAAAAGGAATCCACACTGCATCTGGTCCTCCGTCTGCGTGGTGGC 62571
Score = 86.0 bits (94), Expect = 6e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760
|| |||||||| || | || || || || || || || || || | || || || ||
Sbjct 61805 ACCATGCAGATTTTCGTCAAGACTCTCACGGGCAAGACCATCACCTTGGAGGTCGAGTCC 61864
Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820
| |||||| | || | || || ||||| || || || || || || ||||| ||
Sbjct 61865 AGCGACACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGTATCCCTCCTGAC 61924
Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880
|| || || ||||| || || || || ||||| |||||| | | | || ||||||
Sbjct 61925 CAGCAGCGCTTGATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTTTCCGATTAT 61984
Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGT 24912
||||| || |||||||| || || ||| ||||
Sbjct 61985 AACATCCAGAAGGAATCTACTCTGCACCTGGT 62016
>seq586
Length=168373
Score = 107 bits (118), Expect = 2e-18
Identities = 415/637 (65%), Gaps = 20/637 (3%)
Strand=Plus/Plus
Query 138156 ATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCCCGT 138215
||| |||||||||| |||| | | | ||| | | || | ||| || |||||||| ||
Sbjct 80002 ATCAACAGTAAACTGGATGGGAGCGGAGGCAGCCATGGTACGCAGGTAGTACATTCCAGT 80061
Query 138216 TTTTAA-CCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAG-TAACGCGTAAGTCGGT 138273
|| || |||||||||| | | | ||| || ||||| | | | || || ||
Sbjct 80062 CTTCAAACCCATTTTCCACCCAGCAAA-GTGCATACTGGTGAGCTTGCCCATA-GTAGGC 80119
Query 138274 TTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGCC 138333
| | ||| ||||| | |||||| ||| || |||||||| || || || ||||
Sbjct 80120 TCCTTCAGGTGAATGTTGAGAGATTGAGACTGGTCAATGAAAGCACCACGGTCGGCGGCC 80179
Query 138334 ATGTTAATTAAATTTTTACTTTTC---ATCTCCCACACGGTCTTGTATAGATCACGAATA 138390
|| | | | | ||| || || ||||||||||||||||| ||| | ||
Sbjct 80180 ATCTGCAGGA---TGGTACGTTGGGAGATTTCCCACACGGTCTTGTAGAGAGCCTTGAT- 80235
Query 138391 TGTCG-CGGTATTGTTGC-AATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTTC 138448
|||| ||| | ||||| ||| ||||||| | || | || ||||| || |||
Sbjct 80236 -GTCGGCGGGAATGTTGGGAATGTTTTGAACGGAGCCACCATCTGCGATGATACGGTTTT 80294
Query 138449 TCATGTCATCGTTGTACAGATTCAACTTGATCAAG-TCGTTTATCAGATATCTGTTTATG 138507
|||||| || ||||| | | || |||| || || | || | ||| | |
Sbjct 80295 TCATGTTGTCCGACCACAGACCAAGGTCGA-CAAGATCCTTGAGAAGCCAAGGGTTAACG 80353
Query 138508 ACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAAC 138567
||||| || ||||| || | || || ||| ||| ||||| |||| ||||||||||
Sbjct 80354 ACCTGGAACTCACCAGCAAGAACACGGCGAGAGTAGATGTTCGAGGTGTAAGGCTCAAAA 80413
Query 138568 GATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGA 138627
|||||||| ||||||||||| ||| | ||||| ||||| |||||||| | |
Sbjct 80414 CATTCGTTGAAGCCCAGAATCTGGCTGGTGCTTGCGGTGGGCATCGGTGCCACCAACAAA 80473
Query 138628 GAATTCCGTAAACCGTG--AAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAAT 138685
|| || | |||||| || |||| |||| || || ||||||||| | |
Sbjct 80474 CTGTTACGAACACCGTGCTGGGCAATCTTCG--CCTTCAGAGAATCCCAGTCCCAGAGGT 80531
Query 138686 CGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTT 138745
| | || || ||| ||||||||| ||||| | || ||| | |||| ||| |
Sbjct 80532 CCGTGGGGGTTCTGTCCCACATATCATACTGGAGAATACCCTGAGAGACGGGGGAGCCCT 80591
Query 138746 CGTACGAATCGTATACACCAAACTCTTGCGCCAACTC 138782
|||| | || || ||||||||| | |||| |||
Sbjct 80592 CGTAGGTTTCATAAGGACCAAACTCCTTGGCCAGCTC 80628
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449893826483880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |