Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq630 122 8e-23 seq586 107 2e-18 >seq630 Length=388802 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || ||||| || || || || || || Sbjct 62572 ATGCAGATCTTCGTCAAGACTCTCACCGGAAAGACCATTACCCTGGAGGTGGAGTCCTCC 62631 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| || || || ||||| || || Sbjct 62632 GACACGATTGACAACGTGAAGAGCAAGATCCAAGACAAGGAGGGCATCCCTCCTGACCAG 62691 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || ||| |||| ||| ||| | | | || ||||| || Sbjct 62692 CAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGGAGGACCCTCTCCGATTACAAT 62751 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||||||| || || ||| ||||| |||| |||| || || Sbjct 62752 ATTCAAAAGGAGAGCACGCTCCACCTGGTGCTGCGTCTGCGTGGTGG 62798 Score = 111 bits (122), Expect = 1e-19 Identities = 140/190 (74%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGA-AAC 24777 || || || || || || || ||||| ||||| || ||| ||| ||| || | || ||| Sbjct 62131 AAGACCCTCACTGGCAAGACCATTACTCTCGAGGTGGAATCCAGCGATACCATTGATAAC 62190 Query 24778 GGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTT 24837 | ||| | || |||||| ||||| || || || ||||| || || || ||| |||| || Sbjct 62191 GTTAAGTCGAA-GATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTGATTTT 62249 Query 24838 TGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATC 24897 || || || ||| |||||||| | | | |||| || ||||||||||| |||||||| Sbjct 62250 CGCTGGCAAGCAGTTGGAGGATGGCCGCACCTTGTCCGACTATAACATTCAGAAGGAATC 62309 Query 24898 GACACTACAC 24907 ||| || ||| Sbjct 62310 GACTCTCCAC 62319 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| |||| || || || || || ||||| || | |||||||| | | Sbjct 62344 ATGCAAATCTTCGTTAAGACTCTCACGGGAAAGACTATCACATTAGAAGTAGAGTCTTCA 62403 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| || || || || || ||||| |||||| Sbjct 62404 GACACCATCGACAATGTCAAGAGCAAGATCCAGGATAAGGAGGGTATCCCTCCTGATCAA 62463 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | |||||||| || || || || || ||| | | | |||| ||||| || Sbjct 62464 CAGCGTCTCATCTTTGCTGGAAAGCAACTTGAAGATGGCCGTACCTTGTCTGATTACAAT 62523 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || ||||||||||| ||||| || |||| | || |||| || ||| Sbjct 62524 ATCCAAAAGGAATCCACACTGCATCTGGTCCTCCGTCTGCGTGGTGGC 62571 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || |||||||| || | || || || || || || || || || | || || || || Sbjct 61805 ACCATGCAGATTTTCGTCAAGACTCTCACGGGCAAGACCATCACCTTGGAGGTCGAGTCC 61864 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | |||||| | || | || || ||||| || || || || || || ||||| || Sbjct 61865 AGCGACACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGTATCCCTCCTGAC 61924 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || || ||||| || || || || ||||| |||||| | | | || |||||| Sbjct 61925 CAGCAGCGCTTGATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTTTCCGATTAT 61984 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| || |||||||| || || ||| |||| Sbjct 61985 AACATCCAGAAGGAATCTACTCTGCACCTGGT 62016 >seq586 Length=168373 Score = 107 bits (118), Expect = 2e-18 Identities = 415/637 (65%), Gaps = 20/637 (3%) Strand=Plus/Plus Query 138156 ATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCCCGT 138215 ||| |||||||||| |||| | | | ||| | | || | ||| || |||||||| || Sbjct 80002 ATCAACAGTAAACTGGATGGGAGCGGAGGCAGCCATGGTACGCAGGTAGTACATTCCAGT 80061 Query 138216 TTTTAA-CCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAG-TAACGCGTAAGTCGGT 138273 || || |||||||||| | | | ||| || ||||| | | | || || || Sbjct 80062 CTTCAAACCCATTTTCCACCCAGCAAA-GTGCATACTGGTGAGCTTGCCCATA-GTAGGC 80119 Query 138274 TTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGCC 138333 | | ||| ||||| | |||||| ||| || |||||||| || || || |||| Sbjct 80120 TCCTTCAGGTGAATGTTGAGAGATTGAGACTGGTCAATGAAAGCACCACGGTCGGCGGCC 80179 Query 138334 ATGTTAATTAAATTTTTACTTTTC---ATCTCCCACACGGTCTTGTATAGATCACGAATA 138390 || | | | | ||| || || ||||||||||||||||| ||| | || Sbjct 80180 ATCTGCAGGA---TGGTACGTTGGGAGATTTCCCACACGGTCTTGTAGAGAGCCTTGAT- 80235 Query 138391 TGTCG-CGGTATTGTTGC-AATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTTC 138448 |||| ||| | ||||| ||| ||||||| | || | || ||||| || ||| Sbjct 80236 -GTCGGCGGGAATGTTGGGAATGTTTTGAACGGAGCCACCATCTGCGATGATACGGTTTT 80294 Query 138449 TCATGTCATCGTTGTACAGATTCAACTTGATCAAG-TCGTTTATCAGATATCTGTTTATG 138507 |||||| || ||||| | | || |||| || || | || | ||| | | Sbjct 80295 TCATGTTGTCCGACCACAGACCAAGGTCGA-CAAGATCCTTGAGAAGCCAAGGGTTAACG 80353 Query 138508 ACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAAC 138567 ||||| || ||||| || | || || ||| ||| ||||| |||| |||||||||| Sbjct 80354 ACCTGGAACTCACCAGCAAGAACACGGCGAGAGTAGATGTTCGAGGTGTAAGGCTCAAAA 80413 Query 138568 GATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGA 138627 |||||||| ||||||||||| ||| | ||||| ||||| |||||||| | | Sbjct 80414 CATTCGTTGAAGCCCAGAATCTGGCTGGTGCTTGCGGTGGGCATCGGTGCCACCAACAAA 80473 Query 138628 GAATTCCGTAAACCGTG--AAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAAT 138685 || || | |||||| || |||| |||| || || ||||||||| | | Sbjct 80474 CTGTTACGAACACCGTGCTGGGCAATCTTCG--CCTTCAGAGAATCCCAGTCCCAGAGGT 80531 Query 138686 CGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTT 138745 | | || || ||| ||||||||| ||||| | || ||| | |||| ||| | Sbjct 80532 CCGTGGGGGTTCTGTCCCACATATCATACTGGAGAATACCCTGAGAGACGGGGGAGCCCT 80591 Query 138746 CGTACGAATCGTATACACCAAACTCTTGCGCCAACTC 138782 |||| | || || ||||||||| | |||| ||| Sbjct 80592 CGTAGGTTTCATAAGGACCAAACTCCTTGGCCAGCTC 80628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449893826483880