Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq531 86.0 5e-11 >seq531 Length=104979 Score = 86.0 bits (94), Expect = 5e-11 Identities = 211/320 (66%), Gaps = 0/320 (0%) Strand=Plus/Plus Query 282152 TTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCC 282211 ||||||||||| || | |||| | | |||||||| ||||| || || ||||| ||| Sbjct 68027 TTTCTCTTGAATTCATTAACAAAGTGGTTAACAAGACGGTTATCGAAGTCCTCACCACCC 68086 Query 282212 AATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGA 282271 | | ||| | || | ||||| | || | ||| | || || |||| | || || Sbjct 68087 AGGTGAGTGTCGCCAGCGGTAGCCTTGACCTCGAAGATACCCTCCTCAATGGTCAGGAGG 68146 Query 282272 GTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG 282331 | |||||| || |||||||| | ||| || || || || || || || Sbjct 68147 GAAACATCGAAAGTACCACCACCAAGATCGAAGATCAGGACGTTACGCTCGCCCTCGGCC 68206 Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 || || |||||||| || |||| ||||| ||||| || || || || || | | || Sbjct 68207 TTCTTGTCAAGACCGTAGGCAATGGCAGCGGCAGTAGGCTCGTTGATGATACGGAGGACG 68266 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || || || || || || ||||| || ||||| || | || || ||||| || || Sbjct 68267 TTCAGGCCGGCGATGAGACCAGCATCCTTGGTGGCCTGACGCTGAGAGTCGTTGAAGTAG 68326 Query 282452 GCAGGAACAGTAATAACGGC 282471 || || || || || || || Sbjct 68327 GCGGGGACGGTGATGACAGC 68346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740597456735646