Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq630 138 2e-27 >seq630 Length=388802 Score = 138 bits (152), Expect = 2e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| ||||| | ||||||||||||||| ||||| || |||||||| || ||| | | || Sbjct 62023 ACGGAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAATCGGAAAGAGTGCGGCC 61964 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || || || || ||||| || || | | || || || ||||| || || ||||| Sbjct 61963 ATCCTCGAGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAGGAGGGATACCCTCCTT 61904 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 ||| |||||||| | || ||||| ||||| || || | | || || ||||| || || Sbjct 61903 ATCCTGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGACCTCCAAGGTGAT 61844 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| || | ||||| || || |||||||| Sbjct 61843 GGTCTTGCCCGTGAGAGTCTTGACGAAAATCTGCAT 61808 Score = 134 bits (148), Expect = 3e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | || ||| || || | ||||| || ||||| || || ||||| |||||||| Sbjct 62570 CCACCACGCAGACGGAGGACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAATCAGAC 62511 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | || ||||| ||||| |||||||||||||| || | |||||||| ||||| Sbjct 62510 AAGGTACGGCCATCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCAGGAGGG 62451 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || || |||||||| || ||| ||||| || ||||| || || || || || ||||| Sbjct 62450 ATACCCTCCTTATCCTGGATC-TTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCTAC 62392 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||| || || || ||||| || || | ||||| || || || ||||| Sbjct 62391 TTCTAATGTGATAGTCTTTCCCGTGAGAGTCTTAACGAAGATTTGCAT 62344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981818759047469