Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20var._20RP-
2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq630 138 2e-27
>seq630
Length=388802
Score = 138 bits (152), Expect = 2e-27
Identities = 160/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| ||||| | ||||||||||||||| ||||| || |||||||| || ||| | | ||
Sbjct 62023 ACGGAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAATCGGAAAGAGTGCGGCC 61964
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|| || || || || ||||| || || | | || || || ||||| || || |||||
Sbjct 61963 ATCCTCGAGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAGGAGGGATACCCTCCTT 61904
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
||| |||||||| | || ||||| ||||| || || | | || || ||||| || ||
Sbjct 61903 ATCCTGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGACCTCCAAGGTGAT 61844
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || | ||||| || || ||||||||
Sbjct 61843 GGTCTTGCCCGTGAGAGTCTTGACGAAAATCTGCAT 61808
Score = 134 bits (148), Expect = 3e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || | || ||| || || | ||||| || ||||| || || ||||| ||||||||
Sbjct 62570 CCACCACGCAGACGGAGGACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAATCAGAC 62511
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
| | | || ||||| ||||| |||||||||||||| || | |||||||| |||||
Sbjct 62510 AAGGTACGGCCATCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCAGGAGGG 62451
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| || |||||||| || ||| ||||| || ||||| || || || || || |||||
Sbjct 62450 ATACCCTCCTTATCCTGGATC-TTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCTAC 62392
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||| || || || ||||| || || | ||||| || || || |||||
Sbjct 62391 TTCTAATGTGATAGTCTTTCCCGTGAGAGTCTTAACGAAGATTTGCAT 62344
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981818759047469
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |