Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq405 113 4e-20 >seq405 Length=35189 Score = 113 bits (124), Expect = 4e-20 Identities = 332/509 (65%), Gaps = 27/509 (5%) Strand=Plus/Plus Query 46773 AAAAAGGCCCAGTGGGCCATGAAGTGGATC---GAGAGCGAGACCGCCACGCTGGCCGAG 46829 || ||||||||||||||||||| ||||| || | || | || | || || Sbjct 2420 AAGAAGGCCCAGTGGGCCATGAGATGGATTTCTGATAAGGAATCT---ACTTTCGCTCAG 2476 Query 46830 CGCATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTTTGCCGCCATT 46889 ||| | ||||| ||||| || || || | ||||| || || |||||| |||| Sbjct 2477 CGCCTTGTGGCCTTCGCCGCTGTGGAGGGAATCTTTTTCTCTGGATCTTTTGCTTCCATC 2536 Query 46890 TTTTACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCG 46949 || | | || | ||| | ||||| || || || ||| |||||| | ||||| Sbjct 2537 TTCTGGCTGAAGAAGCGTGGCTTGATGCCTGGTCTCACTTTCTCCAACGAGCTCATCTCT 2596 Query 46950 CGCGACGAAGGACTACACACGGACTTTGCGTG---TCTCTATTACAAGACGCGCGTGAAT 47006 || ||||| ||||||||||| |||||||| || ||||| || | | | |||| Sbjct 2597 CGTGACGAGGGACTACACACAGACTTTGCTTGCCTTCTCTTTT------CTCACTTGAAC 2650 Query 47007 GAGAAATTAAACTCGGACACGA----TCCTGAGCATGTTTAGG--GAGGCGGTGAGCATC 47060 | | | |||| || | |||| || || | ||||| ||| ||| Sbjct 2651 CATCG------CCCCGACAAGAAGGTTATTGAGGATATTATCGTTGAGGCTGTGGCCATT 2704 Query 47061 GAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCT 47120 ||| ||||||| || || | || || || || || | |||||||||||| | || Sbjct 2705 GAACAGGAGTTCTTGACAGACGCTCTTCCTGTTGCTCTCCTGGGCATGAACTCTAAGCTA 2764 Query 47121 ATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAACCGAAA 47180 |||||| | ||||||||||| || || ||||| |||||||| || ||| | ||| Sbjct 2765 ATGTGCCAGTATATTGAGTTCGTTGCTGATCGGCTGTTGGTTGCTCTTGGAAACAAGAAG 2824 Query 47181 TATTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCAAAACC 47240 || || || ||| || || || || || ||| | | || ||||| | || || || Sbjct 2825 TACTTCAACTCTCCCAACCCCTTCGACTTCATGGAAAGTATCTCGCTTGCAGGAAAGACG 2884 Query 47241 AATTTTTTCGAGAAACGAGTCGGAGAGTA 47269 || || || ||||| || || || || || Sbjct 2885 AACTTCTTTGAGAAGCGTGTTGGTGACTA 2913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476607202423560