Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20var._20RP-
2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq405 113 4e-20
>seq405
Length=35189
Score = 113 bits (124), Expect = 4e-20
Identities = 332/509 (65%), Gaps = 27/509 (5%)
Strand=Plus/Plus
Query 46773 AAAAAGGCCCAGTGGGCCATGAAGTGGATC---GAGAGCGAGACCGCCACGCTGGCCGAG 46829
|| ||||||||||||||||||| ||||| || | || | || | || ||
Sbjct 2420 AAGAAGGCCCAGTGGGCCATGAGATGGATTTCTGATAAGGAATCT---ACTTTCGCTCAG 2476
Query 46830 CGCATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTTTGCCGCCATT 46889
||| | ||||| ||||| || || || | ||||| || || |||||| ||||
Sbjct 2477 CGCCTTGTGGCCTTCGCCGCTGTGGAGGGAATCTTTTTCTCTGGATCTTTTGCTTCCATC 2536
Query 46890 TTTTACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCG 46949
|| | | || | ||| | ||||| || || || ||| |||||| | |||||
Sbjct 2537 TTCTGGCTGAAGAAGCGTGGCTTGATGCCTGGTCTCACTTTCTCCAACGAGCTCATCTCT 2596
Query 46950 CGCGACGAAGGACTACACACGGACTTTGCGTG---TCTCTATTACAAGACGCGCGTGAAT 47006
|| ||||| ||||||||||| |||||||| || ||||| || | | | ||||
Sbjct 2597 CGTGACGAGGGACTACACACAGACTTTGCTTGCCTTCTCTTTT------CTCACTTGAAC 2650
Query 47007 GAGAAATTAAACTCGGACACGA----TCCTGAGCATGTTTAGG--GAGGCGGTGAGCATC 47060
| | | |||| || | |||| || || | ||||| ||| |||
Sbjct 2651 CATCG------CCCCGACAAGAAGGTTATTGAGGATATTATCGTTGAGGCTGTGGCCATT 2704
Query 47061 GAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCT 47120
||| ||||||| || || | || || || || || | |||||||||||| | ||
Sbjct 2705 GAACAGGAGTTCTTGACAGACGCTCTTCCTGTTGCTCTCCTGGGCATGAACTCTAAGCTA 2764
Query 47121 ATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAACCGAAA 47180
|||||| | ||||||||||| || || ||||| |||||||| || ||| | |||
Sbjct 2765 ATGTGCCAGTATATTGAGTTCGTTGCTGATCGGCTGTTGGTTGCTCTTGGAAACAAGAAG 2824
Query 47181 TATTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCAAAACC 47240
|| || || ||| || || || || || ||| | | || ||||| | || || ||
Sbjct 2825 TACTTCAACTCTCCCAACCCCTTCGACTTCATGGAAAGTATCTCGCTTGCAGGAAAGACG 2884
Query 47241 AATTTTTTCGAGAAACGAGTCGGAGAGTA 47269
|| || || ||||| || || || || ||
Sbjct 2885 AACTTCTTTGAGAAGCGTGTTGGTGACTA 2913
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476607202423560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |